[←][→] ath   AT3G62940 Gene
functional annotation
Function   Cysteine proteinases superfamily protein  
GO BP
GO:0006508 [list] [network] proteolysis  (901 genes)  IEA  
GO CC
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA IDA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
KEGG
Protein NP_001190165.1  NP_001325819.1  NP_001325820.1  NP_191853.1  NP_850739.1 
BLAST NP_001190165.1  NP_001325819.1  NP_001325820.1  NP_191853.1  NP_850739.1 
Orthologous [Ortholog page] LOC4337022 (osa)  LOC7457965 (ppo)  LOC11430011 (mtr)  LOC25493692 (mtr)  LOC100258001 (vvi)  LOC100284877 (zma)  LOC100780620 (gma)  LOC101251574 (sly)  LOC103862763 (bra) 
Subcellular
localization
wolf
nucl 9  (predict for NP_001190165.1)
nucl 10  (predict for NP_001325819.1)
nucl 9  (predict for NP_001325820.1)
nucl 9  (predict for NP_191853.1)
nucl 10  (predict for NP_850739.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001190165.1)
other 8  (predict for NP_001325819.1)
other 9  (predict for NP_001325820.1)
other 9  (predict for NP_191853.1)
other 8  (predict for NP_850739.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 2
ath03010 Ribosome 2
ath03040 Spliceosome 2
ath03013 RNA transport 2
Genes directly connected with AT3G62940 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.0 AT2G40660 Nucleic acid-binding, OB-fold-like protein [detail] 818661
7.6 AT3G12390 Nascent polypeptide-associated complex (NAC), alpha subunit family protein [detail] 820418
7.4 AT3G19650 cyclin-like protein [detail] 821502
7.1 AT5G53620 RNA polymerase II degradation factor [detail] 835444
6.5 AT3G61370 pre-mRNA-splicing factor CWC22-like protein (DUF3245) [detail] 825309
5.5 AT2G31140 Peptidase S24/S26A/S26B/S26C family protein [detail] 817670
Coexpressed
gene list		 [Coexpressed gene list for AT3G62940]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251149_at
251149_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251149_at
251149_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
251149_at
251149_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 825469      
Refseq ID (protein) NP_001190165.1 
NP_001325819.1 
NP_001325820.1 
NP_191853.1 
NP_850739.1 


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