[←][→] ath   AT3G62980 Gene
functional annotation
Function   F-box/RNI-like superfamily protein  
GO BP
GO:0010152 [list] [network] pollen maturation  (18 genes)  IGI  
GO:0010311 [list] [network] lateral root formation  (55 genes)  IMP  
GO:0048443 [list] [network] stamen development  (101 genes)  IGI  
GO:0016036 [list] [network] cellular response to phosphate starvation  (110 genes)  IEP  
GO:0009873 [list] [network] ethylene-activated signaling pathway  (191 genes)  IEA  
GO:0009734 [list] [network] auxin-activated signaling pathway  (196 genes)  IMP  
GO:0009733 [list] [network] response to auxin  (407 genes)  IMP  
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (436 genes)  TAS  
GO:0007049 [list] [network] cell cycle  (516 genes)  IEA  
GO:0016567 [list] [network] protein ubiquitination  (624 genes)  IEA  
GO:0006952 [list] [network] defense response  (1420 genes)  IEA  
GO CC
GO:0019005 [list] [network] SCF ubiquitin ligase complex  (68 genes)  IDA  
GO:0000151 [list] [network] ubiquitin ligase complex  (277 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
GO:0038198 [list] [network] auxin receptor activity  (1 genes)  IDA  
GO:0010011 [list] [network] auxin binding  (6 genes)  IDA IGI  
GO:0000822 [list] [network] inositol hexakisphosphate binding  (14 genes)  IDA  
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (434 genes)  IC  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath04075 [list] [network] Plant hormone signal transduction (273 genes)
Protein NP_567135.1 
BLAST NP_567135.1 
Orthologous [Ortholog page] GRH1 (ath)  LOC4337827 (osa)  LOC25484780 (mtr)  LOC100233127 (vvi)  LOC100264085 (vvi)  LOC100316892 (sly)  TIR1C (gma)  TIR1B (gma)  TIR1A (gma)  TIR1D (gma)  LOC103635896 (zma)  LOC103830378 (bra)  LOC103842104 (bra)  LOC103846823 (bra)  LOC103858715 (bra)  LOC103862757 (bra) 
Subcellular
localization
wolf
chlo 4,  nucl 4,  plas 1,  extr 1  (predict for NP_567135.1)
Subcellular
localization
TargetP
other 7  (predict for NP_567135.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
Genes directly connected with TIR1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.7 AFB5 auxin F-box protein 5 [detail] 835062
7.2 AT5G01020 Protein kinase superfamily protein [detail] 831918
6.0 AT2G17020 F-box/RNI-like superfamily protein [detail] 816205
5.2 AFB3 auxin signaling F-box 3 [detail] 837838
4.9 ATL4 TOXICOS EN LEVADURA 4 [detail] 825192
4.8 VEL1 vernalization5/VIN3-like protein [detail] 829143
Coexpressed
gene list		 [Coexpressed gene list for TIR1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
251199_at
251199_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
251199_at
251199_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
251199_at
251199_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 825473      
Refseq ID (protein) NP_567135.1 


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