[←][→] ath   At4g00480 Gene
functional annotation
Function   basic helix-loop-helix (bHLH) DNA-binding superfamily protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0048629 [list] [network] trichome patterning  (7 genes)  IMP  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1656 genes)  ISS  
GO CC
GO:0035618 [list] [network] root hair  (23 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10305 genes)  IDA ISM  
GO MF
GO:0046983 [list] [network] protein dimerization activity  (421 genes)  IEA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1576 genes)  ISS  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_001154194.1  NP_001329692.1  NP_191957.2 
BLAST NP_001154194.1  NP_001329692.1  NP_191957.2 
Orthologous [Ortholog page] LOC103836915 (bra) 
Subcellular
localization
wolf
nucl 9  (predict for NP_001154194.1)
nucl 9  (predict for NP_001329692.1)
nucl 9  (predict for NP_191957.2)
Subcellular
localization
TargetP
mito 5,  other 4  (predict for NP_001154194.1)
mito 5,  other 4  (predict for NP_001329692.1)
mito 5,  other 4  (predict for NP_191957.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with ATMYC1 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
10.6 EGL3 basic helix-loop-helix (bHLH) DNA-binding superfamily protein [detail] 842669
6.8 ABCI16 uncharacterized protein [detail] 818307
6.6 AT5G43020 Leucine-rich repeat protein kinase family protein [detail] 834317
4.1 GL3 basic helix-loop-helix (bHLH) DNA-binding superfamily protein [detail] 834133
Coexpressed
gene list		 [Coexpressed gene list for ATMYC1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
255675_at
255675_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
255675_at
255675_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
255675_at
255675_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 827965      
Refseq ID (protein) NP_001154194.1 
NP_001329692.1 
NP_191957.2 


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