[←][→] ath   At4g01460 Gene
functional annotation
Function   basic helix-loop-helix (bHLH) DNA-binding superfamily protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1656 genes)  TAS  
GO CC
GO:0005829 [list] [network] cytosol  (2559 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0000976 [list] [network] transcription cis-regulatory region binding  (708 genes)  IPI  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1576 genes)  ISS  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_001329264.1  NP_192055.1 
BLAST NP_001329264.1  NP_192055.1 
Orthologous [Ortholog page] LOC103836839 (bra) 
Subcellular
localization
wolf
nucl 9,  cyto 1,  extr 1  (predict for NP_001329264.1)
nucl 9,  cyto 1,  extr 1  (predict for NP_192055.1)
Subcellular
localization
TargetP
other 7  (predict for NP_001329264.1)
other 7  (predict for NP_192055.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04016 MAPK signaling pathway - plant 2
Genes directly connected with AT4G01460 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
6.8 STOMAGEN stomagen [detail] 826909
6.7 SCRM2 basic helix-loop-helix (bHLH) DNA-binding superfamily protein [detail] 837843
5.8 HAT3 homeobox-leucine zipper protein 3 [detail] 825210
4.3 AT5G53900 Serine/threonine-protein kinase WNK (With No Lysine)-like protein [detail] 835472
Coexpressed
gene list		 [Coexpressed gene list for AT4G01460]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
255579_at
255579_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
255579_at
255579_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
255579_at
255579_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 828089      
Refseq ID (protein) NP_001329264.1 
NP_192055.1 


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