[][] ath   At4g01850 Gene
functional annotation
Function   S-adenosylmethionine synthetase 2 Plant GARDENPlant GARDEN JBrowse
GO BP
GO CC
GO:0070062 [list] [network] extracellular exosome  (11 genes)  IDA  
GO:0005730 [list] [network] nucleolus  (387 genes)  HDA  
GO:0009505 [list] [network] plant-type cell wall  (498 genes)  HDA  
GO:0009506 [list] [network] plasmodesma  (871 genes)  HDA  
GO:0005829 [list] [network] cytosol  (2559 genes)  HDA IDA RCA  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  ISM  
= more 1 terms =
GO MF
GO:0005507 [list] [network] copper ion binding  (132 genes)  HDA  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG ath00270 [list] [network] Cysteine and methionine metabolism (124 genes)
ath00999 [list] [network] Biosynthesis of various plant secondary metabolites; Including: Crocin biosynthesis, Cannabidiol biosynthesis, Mugineic acid biosynthesis, Pentagalloylglucose biosynthesis, Benzoxazinoid biosynthesis, Gramine biosynthesis, Coumarin biosynthesis, Furanocoumarin biosynthesis, Hordatine biosynthesis, Podophyllotoxin biosynthesis (66 genes)
ath01230 [list] [network] Biosynthesis of amino acids (244 genes)
ath01240 [list] [network] Biosynthesis of cofactors (236 genes)
Protein NP_001078345.1  NP_192094.1 
BLAST NP_001078345.1  NP_192094.1 
Orthologous [Ortholog page] SAM1 (sly)SAM3 (sly)MAT3 (ath)MTO3 (ath)SAM1 (ath)LOC4325163 (osa)LOC4326996 (osa)LOC4337733 (osa)LOC7468135 (ppo)LOC7478878 (ppo)LOC7495188 (ppo)LOC7498224 (ppo)LOC11432371 (mtr)LOC11435308 (mtr)LOC11444997 (mtr)LOC18100144 (ppo)LOC18109929 (ppo)LOC18109930 (ppo)LOC25483956 (mtr)LOC25486640 (mtr)LOC100146080 (tae)LOC100777770 (gma)LOC100778809 (gma)LOC100787994 (gma)LOC100794248 (gma)LOC100799139 (gma)LOC100805448 (gma)LOC100812341 (gma)LOC100816602 (gma)LOC100820392 (gma)LOC101245012 (sly)SAM2 (sly)LOC103836799 (bra)LOC103839308 (bra)LOC103849483 (bra)LOC103857642 (bra)LOC103858801 (bra)LOC103859706 (bra)LOC103865564 (bra)LOC103867247 (bra)LOC123048309 (tae)LOC123061198 (tae)LOC123069861 (tae)LOC123078269 (tae)LOC123127932 (tae)LOC123127933 (tae)LOC123136783 (tae)LOC123137699 (tae)LOC123137700 (tae)LOC123145026 (tae)LOC123145027 (tae)LOC123405946 (hvu)LOC123405986 (hvu)LOC123406099 (hvu)LOC123406276 (hvu)
Subcellular
localization
wolf
cysk 6,  cysk_plas 4,  cyto 2  (predict for NP_001078345.1)
cysk 6,  cysk_plas 4,  cyto 2  (predict for NP_192094.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001078345.1)
other 8  (predict for NP_192094.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01230 Biosynthesis of amino acids 6
ath00270 Cysteine and methionine metabolism 5
ath01240 Biosynthesis of cofactors 4
ath01200 Carbon metabolism 3
ath00999 Biosynthesis of various plant secondary metabolites; Including: Crocin biosynthesis, Cannabidiol biosynthesis, Mugineic acid biosynthesis, Pentagalloylglucose biosynthesis, Benzoxazinoid biosynthesis, Gramine biosynthesis, Coumarin biosynthesis, Furanocoumarin biosynthesis, Hordatine biosynthesis, Podophyllotoxin biosynthesis 3
Genes directly connected with SAM-2 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
10.7 SAM1 S-adenosylmethionine synthetase 1 [detail] 839501
8.8 HOG1 S-adenosyl-L-homocysteine hydrolase [detail] 827028
5.6 DL1C DYNAMIN-like 1C [detail] 838048
Coexpressed
gene list
[Coexpressed gene list for SAM-2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
255552_at
255552_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
255552_at
255552_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
255552_at
255552_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 826987    
Refseq ID (protein) NP_001078345.1 
NP_192094.1 


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