functional annotation |
Function |
Minichromosome maintenance (MCM2/3/5) family protein |
|
GO BP |
GO:0006267 [list] [network] pre-replicative complex assembly involved in nuclear cell cycle DNA replication
|
(5 genes)
|
IBA
|
|
GO:0000727 [list] [network] double-strand break repair via break-induced replication
|
(8 genes)
|
IBA
|
|
GO:0006271 [list] [network] DNA strand elongation involved in DNA replication
|
(12 genes)
|
IBA
|
|
GO:0006270 [list] [network] DNA replication initiation
|
(17 genes)
|
IBA
|
|
GO:0006268 [list] [network] DNA unwinding involved in DNA replication
|
(18 genes)
|
IBA
TAS
|
|
GO:0010182 [list] [network] sugar mediated signaling pathway
|
(37 genes)
|
TAS
|
|
GO:0009555 [list] [network] pollen development
|
(337 genes)
|
IMP
|
|
GO:0009790 [list] [network] embryo development
|
(569 genes)
|
IMP
|
|
|
GO CC |
|
GO MF |
GO:1990518 [list] [network] single-stranded 3'-5' DNA helicase activity
|
(2 genes)
|
IBA
|
|
GO:0003688 [list] [network] DNA replication origin binding
|
(17 genes)
|
IBA
|
|
GO:0003697 [list] [network] single-stranded DNA binding
|
(75 genes)
|
IBA
|
|
GO:0005524 [list] [network] ATP binding
|
(2003 genes)
|
IEA
|
|
GO:0046872 [list] [network] metal ion binding
|
(3180 genes)
|
IEA
|
|
GO:0005515 [list] [network] protein binding
|
(4605 genes)
|
IPI
|
|
|
KEGG |
ath03030 [list] [network] DNA replication (50 genes) |
|
Protein |
NP_001190655.1
NP_192115.1
|
BLAST |
NP_001190655.1
NP_192115.1
|
Orthologous |
[Ortholog page]
LOC542504 (zma)
LOC4352514 (osa)
LOC7491255 (ppo)
LOC11430699 (mtr)
LOC100267599 (vvi)
LOC100273978 (zma)
LOC100802903 (gma)
LOC100811639 (gma)
LOC101243636 (sly)
LOC103836781 (bra)
LOC103858780 (bra)
|
Subcellular localization wolf |
cyto 5,
chlo 1,
nucl 1,
mito 1,
plas 1,
vacu 1,
E.R. 1,
nucl_plas 1,
E.R._vacu 1,
E.R._plas 1,
mito_plas 1
|
(predict for NP_001190655.1)
|
cyto 5,
chlo 1,
nucl 1,
mito 1,
plas 1,
vacu 1,
E.R. 1,
nucl_plas 1,
E.R._vacu 1,
E.R._plas 1,
mito_plas 1
|
(predict for NP_192115.1)
|
|
Subcellular localization TargetP |
other 8
|
(predict for NP_001190655.1)
|
other 8
|
(predict for NP_192115.1)
|
|
Gene coexpression |
Network*for coexpressed genes |
KEGG* ID |
Title |
#genes |
Link to the KEGG* map (Multiple genes) |
ath03030 |
DNA replication |
13 |
|
ath03420 |
Nucleotide excision repair |
3 |
|
ath03430 |
Mismatch repair |
3 |
|
ath03410 |
Base excision repair |
2 |
|
ath03440 |
Homologous recombination |
2 |
|
Genes directly connected with PRL on the network
coex z* |
Locus |
Function* |
Coexpression detail |
Entrez Gene ID* |
20.0 |
MCM4 |
Minichromosome maintenance (MCM2/3/5) family protein |
[detail] |
816142 |
18.9 |
ETG1 |
E2F target protein 1 (ETG1) |
[detail] |
818650 |
18.2 |
MCM2 |
minichromosome maintenance (MCM2/3/5) family protein |
[detail] |
841056 |
18.0 |
MCM6 |
minichromosome maintenance (MCM2/3/5) family protein |
[detail] |
834492 |
17.1 |
POLA2 |
DNA polymerase alpha 2 |
[detail] |
843086 |
16.8 |
PCNA1 |
proliferating cellular nuclear antigen 1 |
[detail] |
837249 |
13.3 |
AT2G44580 |
zinc ion binding protein |
[detail] |
819066 |
11.9 |
PCNA2 |
proliferating cell nuclear antigen 2 |
[detail] |
817506 |
11.1 |
AT4G14120 |
hypothetical protein |
[detail] |
827050 |
|
Coexpressed gene list |
[Coexpressed gene list for PRL]
|
Gene expression |
All samples |
[Expression pattern for all samples]
|
AtGenExpress* (Development) |
255513_at
X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.
|
AtGenExpress* (Stress) |
255513_at
X axis is samples (pdf file), and Y axis is log2-expression.
|
AtGenExpress* (Hormone) |
255513_at
X axis is samples (xls file), and Y axis is log-expression.
|