[←][→] ath   At4g02070 Gene
functional annotation
Function   MUTS homolog 6    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0006290 [list] [network] pyrimidine dimer repair  (8 genes)  IMP  
GO:0006298 [list] [network] mismatch repair  (12 genes)  ISS  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0003684 [list] [network] damaged DNA binding  (9 genes)  IDA  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG ath03430 [list] [network] Mismatch repair (32 genes)
Protein NP_001190656.1  NP_192116.1 
BLAST NP_001190656.1  NP_192116.1 
Orthologous [Ortholog page] LOC542977 (tae)  LOC4347016 (osa)  LOC7469064 (ppo)  LOC7495220 (ppo)  LOC11432526 (mtr)  LOC100811104 (gma)  LOC103858779 (bra)  LOC112326168 (ppo)  LOC112941390 (sly)  LOC123103708 (tae)  LOC123121484 (tae)  LOC123396435 (hvu) 
Subcellular
localization
wolf
chlo 4,  chlo_mito 4,  mito 2,  nucl 1,  plas 1,  cysk 1,  cyto_nucl 1,  cysk_plas 1  (predict for NP_001190656.1)
chlo 4,  chlo_mito 4,  mito 2,  nucl 1,  plas 1,  cysk 1,  cyto_nucl 1,  cysk_plas 1  (predict for NP_192116.1)
Subcellular
localization
TargetP
chlo 7,  mito 4  (predict for NP_001190656.1)
chlo 7,  mito 4  (predict for NP_192116.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 7
ath03430 Mismatch repair 4
ath03410 Base excision repair 2
ath03420 Nucleotide excision repair 2
ath03440 Homologous recombination 2
Genes directly connected with MSH6 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
11.0 MSH2 MUTS homolog 2 [detail] 821383
8.4 RAD5 DNA/RNA helicase protein [detail] 832338
7.7 ICU2 DNA-directed DNA polymerase [detail] 836845
6.9 AT2G06040 F-box/LRR protein [detail] 815159
6.2 MSH1 MUTL protein homolog 1 [detail] 822021
Coexpressed
gene list		 [Coexpressed gene list for MSH6]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
255562_at
255562_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
255562_at
255562_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
255562_at
255562_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 828147      
Refseq ID (protein) NP_001190656.1 
NP_192116.1 


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