[←][→] ath   At4g02530 Gene
functional annotation
Function   chloroplast thylakoid lumen protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0010206 [list] [network] photosystem II repair  (13 genes)  IEA IMP  
GO CC
GO:0009543 [list] [network] chloroplast thylakoid lumen  (50 genes)  HDA IDA  
GO:0031977 [list] [network] thylakoid lumen  (67 genes)  HDA  
GO:0009535 [list] [network] chloroplast thylakoid membrane  (315 genes)  HDA  
GO:0009534 [list] [network] chloroplast thylakoid  (415 genes)  HDA  
GO:0009579 [list] [network] thylakoid  (509 genes)  HDA  
GO:0009941 [list] [network] chloroplast envelope  (582 genes)  HDA  
GO:0009570 [list] [network] chloroplast stroma  (705 genes)  HDA  
GO:0005829 [list] [network] cytosol  (2559 genes)  HDA  
GO:0005739 [list] [network] mitochondrion  (4228 genes)  ISM  
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA ISM  
GO MF
GO:0062068 [list] [network] chloroplast photosystem II binding  (2 genes)  IPI  
KEGG
Protein NP_001319849.1  NP_001328709.1  NP_192162.2 
BLAST NP_001319849.1  NP_001328709.1  NP_192162.2 
Orthologous [Ortholog page] LOC4342001 (osa)  LOC7470090 (ppo)  LOC7485468 (ppo)  LOC25480916 (mtr)  LOC100794397 (gma)  LOC100812589 (gma)  LOC101259513 (sly)  LOC103836735 (bra)  LOC123148583 (tae)  LOC123161995 (tae)  LOC123171591 (tae)  LOC123407145 (hvu)  LOC123429970 (hvu) 
Subcellular
localization
wolf
chlo 9  (predict for NP_001319849.1)
chlo 5,  nucl 1,  golg 1,  cyto 1,  mito 1,  plas 1,  cysk_nucl 1,  mito_plas 1,  cyto_plas 1  (predict for NP_001328709.1)
mito 6,  chlo 3,  cyto_mito 3,  mito_plas 3  (predict for NP_192162.2)
Subcellular
localization
TargetP
chlo 9  (predict for NP_001319849.1)
other 5,  mito 5  (predict for NP_001328709.1)
other 5,  mito 5  (predict for NP_192162.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT4G02530 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
12.5 PRXQ Thioredoxin superfamily protein [detail] 822203
9.7 SEP1 stress enhanced protein 1 [detail] 829567
9.6 PSRP3/1 Ribosomal protein PSRP-3/Ycf65 [detail] 843189
8.7 PnsB5 NAD(P)H dehydrogenase 18 [detail] 834396
7.4 AT1G76450 Photosystem II reaction center PsbP family protein [detail] 843978
Coexpressed
gene list		 [Coexpressed gene list for AT4G02530]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
255440_at
255440_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
255440_at
255440_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
255440_at
255440_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 827927      
Refseq ID (protein) NP_001319849.1 
NP_001328709.1 
NP_192162.2 


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