[←][→] ath   At4g02560 Gene
functional annotation
Function   Homeodomain-like superfamily protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0009911 [list] [network] positive regulation of flower development  (41 genes)  IMP  
GO:0010228 [list] [network] vegetative to reproductive phase transition of meristem  (287 genes)  IMP  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1656 genes)  TAS  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  IDA ISM  
GO MF
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1576 genes)  TAS  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_001190660.1  NP_192165.1 
BLAST NP_001190660.1  NP_192165.1 
Orthologous [Ortholog page] LOC7491316 (ppo)  LOC9267191 (osa)  LOC11433572 (mtr)  LOC18096466 (ppo)  LOC100780237 (gma)  LOC100806633 (gma)  LOC101255241 (sly)  LOC101260081 (sly)  LOC103868201 (bra)  LOC123063270 (tae)  LOC123072213 (tae)  LOC123080461 (tae)  LOC123445357 (hvu) 
Subcellular
localization
wolf
nucl 9  (predict for NP_001190660.1)
nucl 9  (predict for NP_192165.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001190660.1)
other 9  (predict for NP_192165.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 2
Genes directly connected with LD on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
8.8 SWI3C SWITCH/sucrose nonfermenting 3C [detail] 838774
7.9 MED8 mediator subunit 8 [detail] 814836
7.8 AT5G65180 ENTH/VHS family protein [detail] 836642
6.6 VRN2 VEFS-Box of polycomb protein [detail] 827392
6.1 HSF1 heat shock factor 1 [detail] 827496
5.4 AT1G48970 NagB/RpiA/CoA transferase-like superfamily protein [detail] 841319
4.9 AT3G14172 GPI-anchored adhesin-like protein [detail] 5007999
Coexpressed
gene list		 [Coexpressed gene list for LD]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
255444_at
255444_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
255444_at
255444_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
255444_at
255444_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 827904      
Refseq ID (protein) NP_001190660.1 
NP_192165.1 


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