[←][→] ath   At4g05180 Gene
functional annotation
Function   photosystem II subunit Q-2    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO CC
GO:0009543 [list] [network] chloroplast thylakoid lumen  (50 genes)  HDA  
GO:0031977 [list] [network] thylakoid lumen  (67 genes)  HDA  
GO:0048046 [list] [network] apoplast  (305 genes)  HDA  
GO:0009535 [list] [network] chloroplast thylakoid membrane  (315 genes)  HDA  
GO:0009534 [list] [network] chloroplast thylakoid  (415 genes)  HDA  
GO:0009579 [list] [network] thylakoid  (509 genes)  HDA  
GO:0009570 [list] [network] chloroplast stroma  (705 genes)  HDA  
GO:0005829 [list] [network] cytosol  (2559 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA ISM  
GO MF
KEGG ath00195 [list] [network] Photosynthesis (77 genes)
Protein NP_001319873.1  NP_192427.1 
BLAST NP_001319873.1  NP_192427.1 
Orthologous [Ortholog page] PsbQ (sly)  PSBQA (ath)  LOC4343515 (osa)  LOC7490773 (ppo)  LOC7495298 (ppo)  LOC25499987 (mtr)  LOC100049048 (tae)  LOC100306034 (gma)  LOC100499794 (gma)  LOC103839762 (bra)  LOC103858917 (bra)  LOC123052491 (tae)  LOC123425803 (hvu) 
Subcellular
localization
wolf
chlo 9,  mito 1,  E.R._vacu 1  (predict for NP_001319873.1)
chlo 9,  mito 1,  E.R._vacu 1  (predict for NP_192427.1)
Subcellular
localization
TargetP
chlo 7  (predict for NP_001319873.1)
chlo 7  (predict for NP_192427.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00195 Photosynthesis 11
ath00196 Photosynthesis - antenna proteins 8
Genes directly connected with PSBQ-2 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
19.6 PSAO photosystem I subunit O [detail] 837358
18.5 LHCA3 PSI type III chlorophyll a/b-binding protein [detail] 842446
18.0 PSAL photosystem I subunit l [detail] 826892
14.9 PSAE-2 photosystem I subunit E-2 [detail] 816545
11.3 PTAC16 plastid transcriptionally active 16 [detail] 823831
5.4 AT3G55240 Plant protein 1589 of unknown function [detail] 824690
Coexpressed
gene list		 [Coexpressed gene list for PSBQ-2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
255248_at
255248_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
255248_at
255248_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
255248_at
255248_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 825866      
Refseq ID (protein) NP_001319873.1 
NP_192427.1 


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