[←][→] ath   AT4G05330 Gene
functional annotation
Function   ARF-GAP domain 13  
GO BP
GO:0009555 [list] [network] pollen development  (337 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0005096 [list] [network] GTPase activator activity  (59 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
KEGG ath04144 [list] [network] Endocytosis (144 genes)
Protein NP_001328043.1  NP_001328044.1  NP_567292.1 
BLAST NP_001328043.1  NP_001328044.1  NP_567292.1 
Orthologous [Ortholog page] ZAC (ath)  LOC4328629 (osa)  LOC4330565 (osa)  LOC7487566 (ppo)  LOC9271389 (osa)  LOC11412939 (mtr)  LOC100268078 (vvi)  LOC100272989 (zma)  LOC100273517 (zma)  LOC100382772 (zma)  LOC100777084 (gma)  LOC100790876 (gma)  LOC100806567 (gma)  LOC100810806 (gma)  LOC101267752 (sly)  LOC103834200 (bra)  LOC103839751 (bra)  LOC103858686 (bra)  LOC103858804 (bra)  LOC103861217 (bra) 
Subcellular
localization
wolf
chlo 6,  extr 2,  mito 1,  vacu 1,  E.R. 1,  E.R._vacu 1  (predict for NP_001328043.1)
nucl 6,  plas 1,  golg_plas 1,  chlo 1,  mito 1,  chlo_mito 1  (predict for NP_001328044.1)
nucl 6,  plas 1,  golg_plas 1,  chlo 1,  mito 1,  chlo_mito 1  (predict for NP_567292.1)
Subcellular
localization
TargetP
scret 5  (predict for NP_001328043.1)
other 5,  mito 3  (predict for NP_001328044.1)
other 5,  mito 3  (predict for NP_567292.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 2
Genes directly connected with AGD13 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.2 ELF4-L4 ELF4-like 4 [detail] 838318
5.7 NDL1 N-MYC downregulated-like 1 [detail] 835777
5.6 AT2G02410 yacP-like NYN domain protein [detail] 814772
5.6 ATB' ALPHA Protein phosphatase 2A regulatory B subunit family protein [detail] 831828
5.4 CBL2 calcineurin B-like protein 2 [detail] 835697
5.2 AT4G31050 Biotin/lipoate A/B protein ligase family [detail] 829232
4.4 AT5G57830 zein-binding protein (Protein of unknown function, DUF593) [detail] 835893
4.3 AT5G61360 hypothetical protein [detail] 836257
Coexpressed
gene list		 [Coexpressed gene list for AGD13]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
255232_at
255232_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
255232_at
255232_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
255232_at
255232_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 825881      
Refseq ID (protein) NP_001328043.1 
NP_001328044.1 
NP_567292.1 


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