[][] ath   AT4G05460 Gene
functional annotation
Function   RNI-like superfamily protein
GO BP
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (436 genes)  TAS  
GO:0016567 [list] [network] protein ubiquitination  (624 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  IEA ISM  
GO MF
KEGG
Protein NP_567294.1 
BLAST NP_567294.1 
Orthologous [Ortholog page] AT4G03630 (ath)AT4G05470 (ath)AT4G05490 (ath)AT4G05497 (ath)AT5G52480 (ath)LOC4329151 (osa)LOC4329153 (osa)LOC4344869 (osa)LOC4344872 (osa)LOC4344873 (osa)AT4G05475 (ath)LOC11406744 (mtr)LOC11410324 (mtr)LOC11411902 (mtr)LOC11417050 (mtr)LOC11421207 (mtr)LOC11429044 (mtr)LOC11436174 (mtr)LOC11438865 (mtr)LOC11438932 (mtr)LOC11438933 (mtr)LOC11445624 (mtr)LOC11445869 (mtr)LOC11446261 (mtr)LOC25483027 (mtr)LOC25486047 (mtr)LOC25486048 (mtr)LOC25489229 (mtr)LOC25489232 (mtr)LOC25489271 (mtr)LOC25489272 (mtr)LOC25489273 (mtr)LOC25489274 (mtr)LOC25489322 (mtr)LOC25490471 (mtr)LOC25495422 (mtr)LOC25495424 (mtr)AT4G03625 (ath)LOC100265193 (vvi)LOC100273165 (zma)LOC100284322 (zma)LOC100788317 (gma)LOC100801218 (gma)LOC101244098 (sly)LOC101244395 (sly)LOC101244792 (sly)LOC101245566 (sly)LOC101254923 (sly)LOC103836436 (bra)LOC103843448 (bra)LOC103846474 (bra)LOC103846484 (bra)LOC103846493 (bra)LOC103846768 (bra)LOC103848434 (bra)LOC103848441 (bra)LOC103851457 (bra)LOC103858689 (bra)LOC103864224 (bra)LOC109943001 (zma)
Subcellular
localization
wolf
nucl 4,  cyto 4,  cyto_nucl 4  (predict for NP_567294.1)
Subcellular
localization
TargetP
chlo 7,  other 6  (predict for NP_567294.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT4G05460 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
7.2 ATAN11 Transducin/WD40 repeat-like superfamily protein [detail] 837849
6.6 AT3G12650 transmembrane protein [detail] 820445
6.2 MED32 mediator of RNA polymerase II transcription subunit-like protein [detail] 837720
5.3 PEX7 peroxin 7 [detail] 839800
Coexpressed
gene list
[Coexpressed gene list for AT4G05460]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
255231_at
255231_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
255231_at
255231_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
255231_at
255231_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 825896    
Refseq ID (protein) NP_567294.1 


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