ATTED-II : GeneID search result

[←][→] ath AT4G08160 Gene

functional annotation

Function

glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein

GO BP

GO CC

GO:0005576 [list] [network] extracellular region

(3363 genes)

ISM

GO MF

GO:0031176 [list] [network] endo-1,4-beta-xylanase activity

(6 genes)

ISS

KEGG

Protein

NP_001031593.1 NP_192556.2

BLAST

NP_001031593.1 NP_192556.2

Orthologous

[Ortholog page] AT1G10050 (ath) RXF12 (ath) LOC4333697 (osa) LOC4343146 (osa) LOC7472627 (ppo) LOC25482020 (mtr) LOC25490008 (mtr) LOC100253904 (vvi) LOC100784250 (gma) LOC100801147 (gma) LOC100816678 (gma) LOC100818319 (gma) LOC101247815 (sly) LOC101253570 (sly) LOC103625996 (zma) LOC103632299 (zma) LOC103838616 (bra) LOC103843318 (bra) LOC103865100 (bra)

Subcellular
localization
wolf

cyto 7, chlo 1, nucl 1, pero 1, golg 1	(predict for NP_001031593.1)
cyto 8, chlo 1, nucl 1, pero 1	(predict for NP_192556.2)

Subcellular
localization
TargetP

other 9	(predict for NP_001031593.1)
other 9	(predict for NP_192556.2)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with AT4G08160 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
15.3	XCP2	xylem cysteine peptidase 2	[detail]	838677
15.1	AT5G40020	Pathogenesis-related thaumatin superfamily protein	[detail]	833999
15.0	XCP1	xylem cysteine peptidase 1	[detail]	829688
14.0	RXF12	glycosyl hydrolase family 10 protein / carbohydrate-binding domain-containing protein	[detail]	842206
9.9	LAC2	laccase 2	[detail]	817462
6.9	MAP70-5	microtubule-associated proteins 70-5	[detail]	827434

Coexpressed
gene list

[Coexpressed gene list for AT4G08160]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

255150_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

255150_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

255150_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	826365
Refseq ID (protein)	NP_001031593.1
Refseq ID (protein)	NP_192556.2

The preparation time of this page was 0.2 [sec].