[←][→] ath   AT4G08310 Gene
functional annotation
Function   DNA ligase  
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0016874 [list] [network] ligase activity  (232 genes)  IEA  
KEGG
Protein NP_192571.1 
BLAST NP_192571.1 
Orthologous [Ortholog page] AT1G44780 (ath)  LOC4350684 (osa)  LOC7463163 (ppo)  LOC7469147 (ppo)  LOC11411392 (mtr)  LOC100259114 (vvi)  LOC100278623 (zma)  LOC100784437 (gma)  LOC100784738 (gma)  LOC101246887 (sly)  LOC103847732 (bra) 
Subcellular
localization
wolf
nucl 10  (predict for NP_192571.1)
Subcellular
localization
TargetP
other 9  (predict for NP_192571.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT4G08310 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
11.0 AT5G55660 DEK domain-containing chromatin associated protein [detail] 835660
10.6 AT1G80810 Tudor/PWWP/MBT superfamily protein [detail] 844420
10.1 LINC3 little nuclei3 [detail] 843210
10.1 PRP40A pre-mRNA-processing protein 40A [detail] 841057
9.8 AT3G48710 DEK domain-containing chromatin associated protein [detail] 824032
9.3 ELF8 binding protein [detail] 815177
8.8 AT3G09360 Cyclin/Brf1-like TBP-binding protein [detail] 820092
8.7 MBD10 methyl-CPG-binding domain 10 [detail] 838103
8.6 AT5G38840 SMAD/FHA domain-containing protein [detail] 833875
8.3 AT5G08420 RNA-binding KH domain-containing protein [detail] 830741
8.3 AT5G10950 Tudor/PWWP/MBT superfamily protein [detail] 830962
7.5 SWC2 DNA binding protein SWC2 [detail] 818246
7.1 RDM4 RNA-directed DNA methylation 4 [detail] 817578
6.5 AT1G44780 translation initiation factor [detail] 841042
5.5 AT2G38370 weak chloroplast movement under blue light protein (DUF827) [detail] 818418
5.4 RING1A RING 1A [detail] 834451
Coexpressed
gene list		 [Coexpressed gene list for AT4G08310]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
255128_at
255128_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
255128_at
255128_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
255128_at
255128_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 826385      
Refseq ID (protein) NP_192571.1 


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