[←][→] ath   At4g09730 Gene
functional annotation
Function   RH39    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0110102 [list] [network] ribulose bisphosphate carboxylase complex assembly  (9 genes)  IMP  
GO:1901259 [list] [network] chloroplast rRNA processing  (15 genes)  IMP  
GO CC
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA IMP  
GO MF
GO:0070180 [list] [network] large ribosomal subunit rRNA binding  (1 genes)  IDA  
GO:0003724 [list] [network] RNA helicase activity  (45 genes)  IEA  
GO:0016887 [list] [network] ATP hydrolysis activity  (115 genes)  IDA  
GO:0003729 [list] [network] mRNA binding  (1535 genes)  IDA  
KEGG
Protein NP_849348.1 
BLAST NP_849348.1 
Orthologous [Ortholog page] LOC4325344 (osa)  LOC7464782 (ppo)  LOC25496263 (mtr)  LOC100805709 (gma)  RES (sly)  LOC103838871 (bra)  LOC103858536 (bra)  LOC123060414 (tae)  LOC123068942 (tae)  LOC123077481 (tae)  LOC123442935 (hvu) 
Subcellular
localization
wolf
chlo 7,  nucl 2  (predict for NP_849348.1)
Subcellular
localization
TargetP
mito 3  (predict for NP_849348.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with RH39 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
11.6 FLN2 fructokinase-like protein [detail] 843251
11.5 PDE312 Nucleic acid-binding, OB-fold-like protein [detail] 824009
11.4 EMB3108 DEA(D/H)-box RNA helicase family protein [detail] 842293
11.4 CAF1 RNA-binding CRS1 / YhbY (CRM) domain-containing protein [detail] 816521
6.4 AT3G25680 SLH domain protein [detail] 822156
Coexpressed
gene list		 [Coexpressed gene list for RH39]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
255053_at
255053_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
255053_at
255053_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
255053_at
255053_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 826559      
Refseq ID (protein) NP_849348.1 


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