[←][→] ath   At4g09890 Gene
functional annotation
Function   mediator of RNA polymerase II transcription subunit, putative (DUF3511)    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0009733 [list] [network] response to auxin  (384 genes)  IEA  
GO:0071669 [list] [network] plant-type cell wall organization or biogenesis  (489 genes)  IEA  
GO:0014070 [list] [network] response to organic cyclic compound  (807 genes)  IEA  
GO:0042742 [list] [network] defense response to bacterium  (980 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
KEGG
Protein NP_192727.1 
BLAST NP_192727.1 
Orthologous [Ortholog page] LOC4341885 (osa)  LOC7469242 (ppo)  LOC11408542 (mtr)  LOC100306191 (gma)  LOC100527753 (gma)  LOC100776380 (gma)  LOC103838879 (bra)  LOC112999761 (gma)  LOC123148911 (tae)  LOC123161322 (tae)  LOC123168359 (tae)  LOC123411612 (hvu) 
Subcellular
localization
wolf
nucl 9  (predict for NP_192727.1)
Subcellular
localization
TargetP
other 8  (predict for NP_192727.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 7
Genes directly connected with AT4G09890 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
8.1 IAA1 indole-3-acetic acid inducible [detail] 827103
7.3 HAT2 Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein [detail] 834784
7.0 ATAUX2-11 AUX/IAA transcriptional regulator family protein [detail] 834390
6.6 RTFL16 ROTUNDIFOLIA like 16 [detail] 822160
5.8 AT5G41400 RING/U-box superfamily protein [detail] 834142
5.7 BRH1 brassinosteroid-responsive RING-H2 [detail] 825319
3.9 PGL2 6-phosphogluconolactonase 2 [detail] 824098
Coexpressed
gene list		 [Coexpressed gene list for AT4G09890]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
255028_at
255028_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
255028_at
255028_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
255028_at
255028_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 826579      
Refseq ID (protein) NP_192727.1 


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