[][] ath   AT4G09990 Gene
functional annotation
Function   glucuronoxylan 4-O-methyltransferase-like protein (DUF579)
GO BP
GO:0045492 [list] [network] xylan biosynthetic process  (35 genes)  IBA  
GO:0045491 [list] [network] xylan metabolic process  (52 genes)  IBA IMP  
GO:0009834 [list] [network] plant-type secondary cell wall biogenesis  (58 genes)  IBA  
GO:0032259 [list] [network] methylation  (371 genes)  IEA  
GO CC
GO:0000139 [list] [network] Golgi membrane  (404 genes)  IEA  
GO:0005794 [list] [network] Golgi apparatus  (1430 genes)  IBA IDA  
GO:0005576 [list] [network] extracellular region  (3363 genes)  ISM  
GO:0016021 [list] [network] integral component of membrane  (4803 genes)  IEA  
GO MF
GO:0030775 [list] [network] glucuronoxylan 4-O-methyltransferase activity  (6 genes)  IBA IDA  
KEGG
Protein NP_192737.1 
BLAST NP_192737.1 
Orthologous [Ortholog page] GXM3 (ath)GXMT1 (ath)AT1G71690 (ath)LOC4351745 (osa)LOC7455267 (ppo)LOC11409087 (mtr)LOC100255018 (vvi)LOC100260885 (vvi)LOC100261855 (vvi)LOC100780444 (gma)LOC100812805 (gma)LOC100852653 (vvi)LOC101252840 (sly)LOC101258165 (sly)LOC101263550 (sly)LOC103640992 (zma)LOC103831675 (bra)LOC103836322 (bra)LOC103840048 (bra)LOC103868865 (bra)
Subcellular
localization
wolf
chlo 2,  chlo_mito 2,  vacu 2,  mito 1,  cyto 1,  plas 1,  cyto_plas 1  (predict for NP_192737.1)
Subcellular
localization
TargetP
scret 9  (predict for NP_192737.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with GXM2 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
12.0 GXMT1 glucuronoxylan 4-O-methyltransferase-like protein (DUF579) [detail] 840272
10.1 AT2G45750 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [detail] 819183
8.6 AT2G47360 transmembrane protein [detail] 819349
7.8 ROPGEF4 RHO guanyl-nucleotide exchange factor 4 [detail] 819197
7.4 AT3G56230 BTB/POZ domain-containing protein [detail] 824789
6.4 GSTU28 glutathione S-transferase TAU 28 [detail] 841805
4.8 OFP17 ovate family protein 17 [detail] 817590
4.4 ROPGEF3 RHO guanyl-nucleotide exchange factor 3 [detail] 827967
Coexpressed
gene list
[Coexpressed gene list for GXM2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
255005_at
255005_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
255005_at
255005_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
255005_at
255005_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 826590    
Refseq ID (protein) NP_192737.1 


The preparation time of this page was 0.2 [sec].