[←][→] ath   At4g11080 Gene
functional annotation
Function   HMG (high mobility group) box protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0048869 [list] [network] cellular developmental process  (1335 genes)  IEA  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1656 genes)  ISS  
GO:0009888 [list] [network] tissue development  (1806 genes)  IEA  
GO CC
GO:0000794 [list] [network] condensed nuclear chromosome  (13 genes)  IDA  
GO:0000793 [list] [network] condensed chromosome  (31 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1576 genes)  ISS  
KEGG
Protein NP_192846.1 
BLAST NP_192846.1 
Orthologous [Ortholog page] 3xHMG-box2 (ath)  LOC4328927 (osa)  LOC7467101 (ppo)  LOC7497834 (ppo)  LOC25502164 (mtr)  LOC100781995 (gma)  LOC100783033 (gma)  LOC100814709 (gma)  LOC101262334 (sly)  LOC103833907 (bra)  LOC103861435 (bra)  LOC123046610 (tae)  LOC123049950 (tae)  LOC123190342 (tae)  LOC123427779 (hvu) 
Subcellular
localization
wolf
nucl 4,  cyto 4,  chlo 1  (predict for NP_192846.1)
Subcellular
localization
TargetP
chlo 7,  other 3  (predict for NP_192846.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with 3xHMG-box1 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
10.3 3xHMG-box2 HMG (high mobility group) box protein [detail] 828480
8.6 AT2G37420 ATP binding microtubule motor family protein [detail] 818318
8.5 AT3G44050 P-loop containing nucleoside triphosphate hydrolases superfamily protein [detail] 823523
7.7 AT4G17240 structural maintenance of chromosomes protein [detail] 827436
Coexpressed
gene list		 [Coexpressed gene list for 3xHMG-box1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
254964_at
254964_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
254964_at
254964_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
254964_at
254964_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 826709      
Refseq ID (protein) NP_192846.1 


The preparation time of this page was 0.1 [sec].