[][] ath   AT4G11130 Gene
functional annotation
Function   RNA-dependent RNA polymerase 2
GO BP
GO:0010495 [list] [network] long-distance posttranscriptional gene silencing  (3 genes)  IMP  
GO:0070919 [list] [network] production of siRNA involved in chromatin silencing by small RNA  (8 genes)  IBA IMP  
GO:0030422 [list] [network] production of siRNA involved in RNA interference  (34 genes)  IBA IMP  
GO:0009751 [list] [network] response to salicylic acid  (215 genes)  IEP  
GO:0016458 [list] [network] gene silencing  (216 genes)  IMP  
GO:0050832 [list] [network] defense response to fungus  (517 genes)  IMP  
GO CC
GO:0031380 [list] [network] nuclear RNA-directed RNA polymerase complex  (5 genes)  IBA  
GO:0005654 [list] [network] nucleoplasm  (444 genes)  IEA  
GO:0005730 [list] [network] nucleolus  (477 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IBA IDA ISM  
GO MF
GO:0003968 [list] [network] RNA-directed 5'-3' RNA polymerase activity  (7 genes)  IBA  
GO:0003723 [list] [network] RNA binding  (1790 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_192851.1 
BLAST NP_192851.1 
Orthologous [Ortholog page] LOC4336092 (osa)LOC7457721 (ppo)LOC11407970 (mtr)LOC100260325 (vvi)LOC100502460 (zma)LOC100789458 (gma)LOC100808274 (gma)LOC101250389 (sly)LOC103833901 (bra)
Subcellular
localization
wolf
chlo 4,  cyto 3,  nucl 1,  mito 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_192851.1)
Subcellular
localization
TargetP
other 7  (predict for NP_192851.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with RDR2 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
6.8 DCL3 dicer-like 3 [detail] 823508
5.0 AT4G24610 pesticidal crystal cry8Ba protein [detail] 828563
4.9 AT5G62710 Leucine-rich repeat protein kinase family protein [detail] 836392
4.4 NRPD1A nuclear RNA polymerase D1A [detail] 842605
Coexpressed
gene list
[Coexpressed gene list for RDR2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
254933_at
254933_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
254933_at
254933_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
254933_at
254933_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 826714    
Refseq ID (protein) NP_192851.1 


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