[←][→] ath   At4g12640 Gene
functional annotation
Function   RNA recognition motif (RRM)-containing protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0010228 [list] [network] vegetative to reproductive phase transition of meristem  (287 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
KEGG
Protein NP_001328071.1  NP_001328072.1  NP_001328073.1  NP_193001.2 
BLAST NP_001328071.1  NP_001328072.1  NP_001328073.1  NP_193001.2 
Orthologous [Ortholog page] LOC4346659 (osa)  LOC7456026 (ppo)  LOC11427549 (mtr)  LOC100811668 (gma)  LOC100816831 (gma)  LOC101262385 (sly)  LOC103872442 (bra)  LOC123103456 (tae)  LOC123111659 (tae)  LOC123121125 (tae)  LOC123452410 (hvu) 
Subcellular
localization
wolf
nucl 7,  chlo 2  (predict for NP_001328071.1)
nucl 7,  chlo 2  (predict for NP_001328072.1)
nucl 7,  chlo 2  (predict for NP_001328073.1)
nucl 8,  chlo 1  (predict for NP_193001.2)
Subcellular
localization
TargetP
other 9  (predict for NP_001328071.1)
other 9  (predict for NP_001328072.1)
other 9  (predict for NP_001328073.1)
other 5,  mito 4  (predict for NP_193001.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
Genes directly connected with AT4G12640 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
6.4 PRP39-2 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 834683
6.0 HVT1 helicase in vascular tissue and tapetum [detail] 817631
5.9 AT1G10180 LOW protein: exocyst complex component-like protein [detail] 837556
5.9 AT2G31370 Basic-leucine zipper (bZIP) transcription factor family protein [detail] 817695
Coexpressed
gene list		 [Coexpressed gene list for AT4G12640]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
254826_at
254826_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
254826_at
254826_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
254826_at
254826_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 826877      
Refseq ID (protein) NP_001328071.1 
NP_001328072.1 
NP_001328073.1 
NP_193001.2 


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