[][] ath   AT4G13100 Gene
functional annotation
Function   RING/U-box superfamily protein
GO BP
GO CC
GO:0005739 [list] [network] mitochondrion  (4405 genes)  ISM  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
KEGG
Protein NP_001078383.1  NP_001190713.1  NP_001190714.1  NP_001329821.1  NP_001329822.1  NP_001329823.1  NP_001329824.1  NP_193046.2  NP_849372.2 
BLAST NP_001078383.1  NP_001190713.1  NP_001190714.1  NP_001329821.1  NP_001329822.1  NP_001329823.1  NP_001329824.1  NP_193046.2  NP_849372.2 
Orthologous [Ortholog page] AT3G25030 (ath)AT4G03965 (ath)AT4G22250 (ath)AT1G62370 (ath)LOC4324357 (osa)LOC7468527 (ppo)LOC9267854 (osa)LOC11434492 (mtr)LOC11438347 (mtr)LOC11446421 (mtr)LOC100253430 (vvi)LOC100381751 (zma)LOC100792613 (gma)LOC100802736 (gma)LOC100804292 (gma)LOC100804959 (gma)LOC100819018 (gma)LOC100852917 (vvi)LOC101254727 (sly)LOC101256883 (sly)LOC101265899 (sly)LOC101267539 (sly)LOC103636359 (zma)LOC103647569 (zma)LOC103828589 (bra)LOC103848182 (bra)LOC103858646 (bra)LOC103859901 (bra)LOC103861291 (bra)LOC104645789 (sly)LOC106799504 (gma)LOC109941172 (zma)
Subcellular
localization
wolf
chlo 3,  cyto 3,  plas 2,  cyto_nucl 2  (predict for NP_001078383.1)
chlo 3,  cyto 3,  plas 2,  cyto_nucl 2  (predict for NP_001190713.1)
chlo 3,  cyto 3,  plas 2,  cyto_nucl 2  (predict for NP_001190714.1)
chlo 3,  nucl 2,  plas 2,  cysk_nucl 1,  cyto_plas 1  (predict for NP_001329821.1)
chlo 3,  cyto 3,  plas 2,  cyto_nucl 2  (predict for NP_001329822.1)
chlo 3,  cyto 3,  plas 2,  cyto_nucl 2  (predict for NP_001329823.1)
chlo 3,  cyto 3,  plas 2,  cyto_nucl 2  (predict for NP_001329824.1)
chlo 3,  cyto 3,  plas 2,  cyto_nucl 2  (predict for NP_193046.2)
chlo 5,  nucl 1,  plas 1,  nucl_plas 1  (predict for NP_849372.2)
Subcellular
localization
TargetP
other 6  (predict for NP_001078383.1)
other 4,  chlo 4  (predict for NP_001190713.1)
other 6  (predict for NP_001190714.1)
other 6  (predict for NP_001329821.1)
other 6  (predict for NP_001329822.1)
other 6  (predict for NP_001329823.1)
other 6  (predict for NP_001329824.1)
other 6  (predict for NP_193046.2)
other 2  (predict for NP_849372.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT4G13100 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
5.1 AT3G25030 RING/U-box superfamily protein [detail] 822094
4.5 AT4G00520 Acyl-CoA thioesterase family protein [detail] 827955
4.2 AT5G23920 transmembrane protein [detail] 832457
Coexpressed
gene list
[Coexpressed gene list for AT4G13100]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
254803_at
254803_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
254803_at
254803_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
254803_at
254803_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 826924    
Refseq ID (protein) NP_001078383.1 
NP_001190713.1 
NP_001190714.1 
NP_001329821.1 
NP_001329822.1 
NP_001329823.1 
NP_001329824.1 
NP_193046.2 
NP_849372.2 


The preparation time of this page was 0.2 [sec].