[←][→] ath   At4g13940 Gene
functional annotation
Function   S-adenosyl-L-homocysteine hydrolase    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0006346 [list] [network] DNA methylation-dependent heterochromatin formation  (46 genes)  IMP  
GO:0016441 [list] [network] post-transcriptional gene silencing  (105 genes)  IMP  
GO:0009793 [list] [network] embryo development ending in seed dormancy  (697 genes)  IMP NAS  
GO CC
GO:0000325 [list] [network] plant-type vacuole  (785 genes)  HDA  
GO:0009506 [list] [network] plasmodesma  (871 genes)  HDA  
GO:0005773 [list] [network] vacuole  (971 genes)  HDA  
GO:0005794 [list] [network] Golgi apparatus  (1182 genes)  RCA  
GO:0005886 [list] [network] plasma membrane  (2529 genes)  HDA  
GO:0005829 [list] [network] cytosol  (2559 genes)  HDA  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  ISM  
GO MF
GO:0004013 [list] [network] adenosylhomocysteinase activity  (1 genes)  IMP  
GO:0005507 [list] [network] copper ion binding  (132 genes)  HDA  
GO:0003729 [list] [network] mRNA binding  (1535 genes)  IDA  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG ath00270 [list] [network] Cysteine and methionine metabolism (124 genes)
Protein NP_001031627.1  NP_001031628.1  NP_001078387.1  NP_193130.1 
BLAST NP_001031627.1  NP_001031628.1  NP_001078387.1  NP_193130.1 
Orthologous [Ortholog page] SAHH (tae)  SAHH (sly)  SAHH2 (ath)  LOC4350455 (osa)  LOC7495837 (ppo)  LOC11406131 (mtr)  LOC11444163 (mtr)  LOC18107099 (ppo)  LOC100786939 (gma)  LOC100787210 (gma)  LOC100815953 (gma)  LOC101248518 (sly)  LOC101259420 (sly)  LOC103828704 (bra)  LOC103832114 (bra)  LOC103833147 (bra)  LOC103860008 (bra)  LOC103863580 (bra)  LOC123046944 (tae)  LOC123054777 (tae)  LOC123054799 (tae)  LOC123190618 (tae)  LOC123190642 (tae)  LOC123428004 (hvu)  LOC123428026 (hvu) 
Subcellular
localization
wolf
cysk 6,  cyto 1,  nucl 1,  golg 1,  E.R._vacu 1,  cyto_pero 1,  cyto_plas 1  (predict for NP_001031627.1)
cyto 9,  nucl 1,  mito 1  (predict for NP_001031628.1)
cyto 6,  pero 2,  nucl 1,  cysk_nucl 1  (predict for NP_001078387.1)
cyto 6,  chlo 1,  nucl 1  (predict for NP_193130.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001031627.1)
other 8  (predict for NP_001031628.1)
other 8  (predict for NP_001078387.1)
other 8  (predict for NP_193130.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01230 Biosynthesis of amino acids 10
ath00270 Cysteine and methionine metabolism 9
ath01200 Carbon metabolism 6
ath01240 Biosynthesis of cofactors 5
ath00260 Glycine, serine and threonine metabolism 3
Genes directly connected with HOG1 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
10.3 MAT3 methionine adenosyltransferase 3 [detail] 818260
9.3 SHM4 serine hydroxymethyltransferase 4 [detail] 827027
9.0 SAM1 S-adenosylmethionine synthetase 1 [detail] 839501
9.0 PDE345 Aldolase superfamily protein [detail] 814643
8.8 SAM-2 S-adenosylmethionine synthetase 2 [detail] 826987
6.8 EDA9 D-3-phosphoglycerate dehydrogenase [detail] 829568
5.4 AT4G35080 high-affinity nickel-transport family protein [detail] 829660
5.4 SHS1 Mitochondrial substrate carrier family protein [detail] 829375
5.2 AT3G08630 alphavirus core family protein (DUF3411) [detail] 820010
Coexpressed
gene list		 [Coexpressed gene list for HOG1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
245356_at
245356_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
245356_at
245356_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
245356_at
245356_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 827028      
Refseq ID (protein) NP_001031627.1 
NP_001031628.1 
NP_001078387.1 
NP_193130.1 


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