[←][→] ath   At4g14110 Gene
functional annotation
Function   COP9 signalosome, subunit CSN8      
GO BP
GO:0010387 [list] [network] COP9 signalosome assembly  (6 genes)  IMP  
GO:0000338 [list] [network] protein deneddylation  (12 genes)  IMP TAS  
GO:0009640 [list] [network] photomorphogenesis  (80 genes)  TAS  
GO:0009753 [list] [network] response to jasmonic acid  (611 genes)  IMP  
GO:0009416 [list] [network] response to light stimulus  (1981 genes)  IMP  
GO CC
GO:0008180 [list] [network] COP9 signalosome  (10 genes)  IDA TAS  
GO:0005634 [list] [network] nucleus  (10305 genes)  IDA  
GO MF
GO:0004222 [list] [network] metalloendopeptidase activity  (34 genes)  TAS  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_193147.1 
BLAST NP_193147.1 
Orthologous [Ortholog page] LOC4335854 (osa)  LOC7470529 (ppo)  LOC11433860 (mtr)  LOC100500543 (gma)  LOC100801424 (gma)  LOC101263551 (sly)  LOC103833790 (bra)  LOC103863564 (bra)  LOC123045465 (tae)  LOC123053308 (tae)  LOC123189210 (tae)  LOC123426722 (hvu) 
Subcellular
localization
wolf
cyto 6,  cyto_E.R. 4,  chlo 3  (predict for NP_193147.1)
Subcellular
localization
TargetP
other 7,  scret 6  (predict for NP_193147.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 3
ath04120 Ubiquitin mediated proteolysis 2
ath03420 Nucleotide excision repair 2
ath03050 Proteasome 2
Genes directly connected with COP9 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
7.3 RBX1 RING-box 1 [detail] 832179
7.3 RPN13 regulatory particle non-ATPase 13 [detail] 817200
7.0 PDF2 prefoldin 2 [detail] 821819
6.4 PBS2 cysteine and histidine-rich domain-containing protein RAR1 [detail] 835244
Coexpressed
gene list		 [Coexpressed gene list for COP9]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
245255_at
245255_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
245255_at
245255_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
245255_at
245255_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 827049      
Refseq ID (protein) NP_193147.1 


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