[←][→] ath   At4g14440 Gene
functional annotation
Function   3-hydroxyacyl-CoA dehydratase 1    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0009062 [list] [network] fatty acid catabolic process  (32 genes)  IMP  
GO CC
GO:0005777 [list] [network] peroxisome  (311 genes)  IDA  
GO:0005829 [list] [network] cytosol  (2559 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10305 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  ISM  
GO MF
GO:0008809 [list] [network] carnitine racemase activity  (2 genes)  ISS  
GO:0004165 [list] [network] delta(3)-delta(2)-enoyl-CoA isomerase activity  (3 genes)  IDA IGI  
KEGG ath00071 [list] [network] Fatty acid degradation (47 genes)
ath04626 [list] [network] Plant-pathogen interaction (204 genes)
Protein NP_193180.1 
BLAST NP_193180.1 
Orthologous [Ortholog page] IBR10 (ath)  ECI1 (ath)  LOC4339402 (osa)  LOC7489583 (ppo)  LOC7492421 (ppo)  LOC11423941 (mtr)  LOC11438311 (mtr)  LOC11446098 (mtr)  LOC18101590 (ppo)  LOC100786464 (gma)  LOC100797754 (gma)  LOC100819162 (gma)  LOC101250512 (sly)  LOC101256710 (sly)  LOC101256875 (sly)  LOC101257169 (sly)  LOC103833439 (bra)  LOC103837234 (bra)  LOC103852243 (bra)  LOC103863519 (bra)  LOC123064030 (tae)  LOC123141449 (tae)  LOC123173657 (tae)  LOC123182725 (tae)  LOC123448821 (hvu) 
Subcellular
localization
wolf
cyto 4,  chlo 4,  plas 1,  nucl_plas 1  (predict for NP_193180.1)
Subcellular
localization
TargetP
other 8  (predict for NP_193180.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00062 Fatty acid elongation 7
ath04626 Plant-pathogen interaction 5
ath01212 Fatty acid metabolism 4
ath00564 Glycerophospholipid metabolism 3
ath01040 Biosynthesis of unsaturated fatty acids 3
Genes directly connected with HCD1 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
12.3 GPAT4 glycerol-3-phosphate acyltransferase 4 [detail] 839297
11.6 LACS2 long-chain acyl-CoA synthetase 2 [detail] 841367
10.8 HHP1 heptahelical transmembrane protein1 [detail] 832149
9.3 CYP86A8 cytochrome P450, family 86, subfamily A, polypeptide 8 [detail] 819205
7.9 KCS2 3-ketoacyl-CoA synthase 2 [detail] 839578
7.5 GPDHC1 6-phosphogluconate dehydrogenase family protein [detail] 818752
6.8 AT5G19290 alpha/beta-Hydrolases superfamily protein [detail] 832049
6.2 NIP1;2 NOD26-like intrinsic protein 1;2 [detail] 827626
6.1 AT3G11210 SGNH hydrolase-type esterase superfamily protein [detail] 820291
5.3 AT2G47630 alpha/beta-Hydrolases superfamily protein [detail] 819376
Coexpressed
gene list		 [Coexpressed gene list for HCD1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
245612_at
245612_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
245612_at
245612_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
245612_at
245612_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 827089      
Refseq ID (protein) NP_193180.1 


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