[←][→] ath   AT4G14440 Gene
functional annotation
Function   3-hydroxyacyl-CoA dehydratase 1  
GO BP
GO:0006635 [list] [network] fatty acid beta-oxidation  (35 genes)  IBA IEA  
GO:0009062 [list] [network] fatty acid catabolic process  (38 genes)  IMP  
GO:0080167 [list] [network] response to karrikin  (128 genes)  IEP  
GO CC
GO:0005777 [list] [network] peroxisome  (325 genes)  IBA IDA  
GO:0005829 [list] [network] cytosol  (3506 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
GO:0008809 [list] [network] carnitine racemase activity  (2 genes)  ISS  
GO:0004165 [list] [network] dodecenoyl-CoA delta-isomerase activity  (5 genes)  IBA IDA IGI  
GO:0004300 [list] [network] enoyl-CoA hydratase activity  (7 genes)  IBA  
KEGG ath00071 [list] [network] Fatty acid degradation (47 genes)
ath04626 [list] [network] Plant-pathogen interaction (170 genes)
Protein NP_193180.1 
BLAST NP_193180.1 
Orthologous [Ortholog page] IBR10 (ath)  ECI1 (ath)  LOC4339402 (osa)  LOC7489583 (ppo)  LOC7492421 (ppo)  LOC11423941 (mtr)  LOC11438311 (mtr)  LOC11446098 (mtr)  LOC100241037 (vvi)  LOC100246098 (vvi)  LOC100261285 (vvi)  LOC100266490 (vvi)  LOC100284027 (zma)  LOC100786464 (gma)  LOC100797754 (gma)  LOC100819162 (gma)  LOC101250512 (sly)  LOC101256710 (sly)  LOC101256875 (sly)  LOC101257169 (sly)  LOC103833439 (bra)  LOC103837234 (bra)  LOC103852243 (bra)  LOC103863519 (bra) 
Subcellular
localization
wolf
cyto 4,  chlo 4,  plas 1,  nucl_plas 1  (predict for NP_193180.1)
Subcellular
localization
TargetP
other 8  (predict for NP_193180.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00062 Fatty acid elongation 3
ath04626 Plant-pathogen interaction 3
ath00564 Glycerophospholipid metabolism 2
ath00071 Fatty acid degradation 2
Genes directly connected with HCD1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
10.4 GPAT4 glycerol-3-phosphate acyltransferase 4 [detail] 839297
10.1 LACS2 long-chain acyl-CoA synthetase 2 [detail] 841367
10.1 KCS10 3-ketoacyl-CoA synthase 10 [detail] 817165
8.4 CYP86A8 cytochrome P450, family 86, subfamily A, polypeptide 8 [detail] 819205
6.9 AT5G19290 alpha/beta-Hydrolases superfamily protein [detail] 832049
6.9 KCS2 3-ketoacyl-CoA synthase 2 [detail] 839578
5.6 NIP1;2 NOD26-like intrinsic protein 1;2 [detail] 827626
5.4 AT3G11210 SGNH hydrolase-type esterase superfamily protein [detail] 820291
5.0 AT1G78210 alpha/beta-Hydrolases superfamily protein [detail] 844157
4.9 AT2G12462 sterile alpha motif (SAM) domain protein [detail] 3768692
Coexpressed
gene list		 [Coexpressed gene list for HCD1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
245612_at
245612_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
245612_at
245612_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
245612_at
245612_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 827089      
Refseq ID (protein) NP_193180.1 


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