ATTED-II : GeneID search result

[←][→] ath At4g14880 Gene

functional annotation

Function

O-acetylserine (thiol) lyase (OAS-TL) isoform A1

GO BP

GO:0006535 [list] [network] cysteine biosynthetic process from serine	(6 genes)	TAS
GO:0019344 [list] [network] cysteine biosynthetic process	(12 genes)	IMP
GO:0009567 [list] [network] double fertilization forming a zygote and endosperm	(40 genes)	IGI
GO:0007568 [list] [network] aging	(67 genes)	IMP
GO:0046686 [list] [network] response to cadmium ion	(90 genes)	IDA IEP IMP
GO:0009860 [list] [network] pollen tube growth	(149 genes)	IGI

GO CC

GO:0048046 [list] [network] apoplast	(305 genes)	HDA
GO:0005777 [list] [network] peroxisome	(311 genes)	HDA
GO:0009570 [list] [network] chloroplast stroma	(705 genes)	HDA
GO:0000325 [list] [network] plant-type vacuole	(785 genes)	HDA
GO:0005886 [list] [network] plasma membrane	(2529 genes)	HDA
GO:0005829 [list] [network] cytosol	(2559 genes)	HDA ISS
GO:0009507 [list] [network] chloroplast	(5004 genes)	HDA ISM
GO:0005634 [list] [network] nucleus	(10305 genes)	HDA

GO MF

GO:0004124 [list] [network] cysteine synthase activity	(8 genes)	IDA IGI
GO:0003729 [list] [network] mRNA binding	(1535 genes)	IDA
GO:0005515 [list] [network] protein binding	(5066 genes)	IPI

KEGG

ath00270 [list] [network] Cysteine and methionine metabolism (124 genes)

ath00920 [list] [network] Sulfur metabolism (42 genes)

ath01200 [list] [network] Carbon metabolism (273 genes)

ath01230 [list] [network] Biosynthesis of amino acids (244 genes)

Protein

NP_001190732.1 NP_001190733.1 NP_001328013.1 NP_193224.1 NP_849386.1

BLAST

NP_001190732.1 NP_001190733.1 NP_001328013.1 NP_193224.1 NP_849386.1

Orthologous

[Ortholog page] LOC543181 (tae) LOC547631 (gma) OASB (ath) CYSD1 (ath) OASA2 (ath) OASC (ath) CYSD2 (ath) DES1 (ath) LOC4327819 (osa) LOC4334101 (osa) LOC4352839 (osa) LOC7473407 (ppo) LOC11410728 (mtr) LOC11410729 (mtr) LOC11441090 (mtr) LOC11443458 (mtr) LOC11445174 (mtr) LOC11445175 (mtr) LOC18098918 (ppo) LOC18098921 (ppo) LOC18098924 (ppo) LOC18098926 (ppo) LOC18104598 (ppo) LOC18110974 (ppo) LOC18110977 (ppo) LOC25484655 (mtr) LOC25485205 (mtr) OAS-TL1 (gma) OAS-TL2 (gma) OAS-TL6 (gma) OAS-TL4 (gma) OAS-TL7 (gma) LOC100775420 (gma) LOC100794958 (gma) LOC100815330 (gma) LOC100818242 (gma) LOC101244415 (sly) LOC101246283 (sly) LOC101246567 (sly) LOC101254617 (sly) OASA4 (bra) LOC103837317 (bra) LOC103854642 (bra) LOC103859070 (bra) LOC103862931 (bra) LOC103866104 (bra) LOC103866743 (bra) LOC103871539 (bra) LOC112323242 (ppo) LOC112323252 (ppo) LOC123041396 (tae) LOC123049383 (tae) LOC123060240 (tae) LOC123068744 (tae) LOC123077247 (tae) LOC123430277 (hvu) LOC123442777 (hvu) LOC123452200 (hvu)

Subcellular
localization
wolf

cyto 4, chlo 3, mito 2, cyto_pero 2, cyto_E.R. 2, cyto_plas 2	(predict for NP_001190732.1)
cyto 4, chlo 3, mito 2, cyto_pero 2, cyto_E.R. 2, cyto_plas 2	(predict for NP_001190733.1)
cyto 4, chlo 3, mito 2, cyto_pero 2, cyto_E.R. 2, cyto_plas 2	(predict for NP_001328013.1)
cyto 4, chlo 3, mito 2, cyto_pero 2, cyto_E.R. 2, cyto_plas 2	(predict for NP_193224.1)
cyto 4, chlo 3, mito 2, cyto_pero 2, cyto_E.R. 2, cyto_plas 2	(predict for NP_849386.1)

Subcellular
localization
TargetP

other 8	(predict for NP_001190732.1)
other 8	(predict for NP_001190733.1)
other 8	(predict for NP_001328013.1)
other 8	(predict for NP_193224.1)
other 8	(predict for NP_849386.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath01200	Carbon metabolism	4
ath00480	Glutathione metabolism	4
ath00190	Oxidative phosphorylation	4
ath04145	Phagosome	4
ath01230	Biosynthesis of amino acids	3

Genes directly connected with OASA1 on the network
coex z^*	Locus	Function^*	CoexViewer	Entrez Gene ID^*
6.4	AT3G58730	vacuolar ATP synthase subunit D (VATD) / V-ATPase D subunit / vacuolar proton pump D subunit (VATPD)	[detail]	825042
6.4	GRF9	general regulatory factor 9	[detail]	818859
6.2	AT4G13360	ATP-dependent caseinolytic (Clp) protease/crotonase family protein	[detail]	826967

Coexpressed
gene list

[Coexpressed gene list for OASA1]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

245286_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

245286_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

245286_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	827145
Refseq ID (protein)	NP_001190732.1
	NP_001190733.1
	NP_001328013.1
	NP_193224.1
	NP_849386.1

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