[←][→] ath   AT4G15090 Gene
functional annotation
Function   FRS (FAR1 Related Sequences) transcription factor family  
GO BP
GO:0010018 [list] [network] far-red light signaling pathway  (4 genes)  IMP  
GO:0042753 [list] [network] positive regulation of circadian rhythm  (12 genes)  IMP  
GO:0010218 [list] [network] response to far red light  (54 genes)  IMP  
GO:0010017 [list] [network] red or far-red light signaling pathway  (76 genes)  IMP  
GO:0009639 [list] [network] response to red or far red light  (215 genes)  IMP  
GO:0045893 [list] [network] positive regulation of transcription, DNA-templated  (495 genes)  IDA  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA ISM  
GO MF
GO:0008270 [list] [network] zinc ion binding  (554 genes)  IEA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1599 genes)  IDA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_001329443.1  NP_001329444.1  NP_001329445.1  NP_001329446.1  NP_567455.4 
BLAST NP_001329443.1  NP_001329444.1  NP_001329445.1  NP_001329446.1  NP_567455.4 
Orthologous [Ortholog page] LOC7495635 (ppo)  LOC100251986 (vvi)  LOC100805377 (gma)  LOC100814153 (gma)  LOC101258392 (sly)  LOC103871343 (bra)  LOC112416729 (mtr)  LOC112419409 (mtr) 
Subcellular
localization
wolf
nucl 9  (predict for NP_001329443.1)
nucl 9  (predict for NP_001329444.1)
nucl 9  (predict for NP_001329445.1)
nucl 9  (predict for NP_001329446.1)
nucl 9  (predict for NP_567455.4)
Subcellular
localization
TargetP
other 9  (predict for NP_001329443.1)
other 9  (predict for NP_001329444.1)
other 9  (predict for NP_001329445.1)
other 9  (predict for NP_001329446.1)
other 9  (predict for NP_567455.4)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00310 Lysine degradation 2
Genes directly connected with FAR1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.6 AT5G27240 DNAJ heat shock N-terminal domain-containing protein [detail] 832782
5.5 REF6 relative of early flowering 6 [detail] 824002
5.5 AT2G45700 sterile alpha motif (SAM) domain-containing protein [detail] 819178
Coexpressed
gene list		 [Coexpressed gene list for FAR1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
245256_at
245256_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
245256_at
245256_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
245256_at
245256_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 827173      
Refseq ID (protein) NP_001329443.1 
NP_001329444.1 
NP_001329445.1 
NP_001329446.1 
NP_567455.4 


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