[←][→] ath   AT4G15510 Gene
functional annotation
Function   Photosystem II reaction center PsbP family protein  
GO BP
GO:0048564 [list] [network] photosystem I assembly  (16 genes)  IMP  
GO CC
GO:0009654 [list] [network] photosystem II oxygen evolving complex  (21 genes)  IEA  
GO:0009543 [list] [network] chloroplast thylakoid lumen  (59 genes)  IDA  
GO:0019898 [list] [network] extrinsic component of membrane  (62 genes)  IEA  
GO:0031977 [list] [network] thylakoid lumen  (72 genes)  IDA  
GO:0009535 [list] [network] chloroplast thylakoid membrane  (373 genes)  IDA  
GO:0009579 [list] [network] thylakoid  (543 genes)  IDA  
GO:0009570 [list] [network] chloroplast stroma  (750 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  HDA IDA ISM  
GO MF
GO:0005509 [list] [network] calcium ion binding  (242 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_001031646.1  NP_001328785.1  NP_001328786.1  NP_567468.1  NP_974555.1 
BLAST NP_001031646.1  NP_001328785.1  NP_001328786.1  NP_567468.1  NP_974555.1 
Orthologous [Ortholog page] LOC4342913 (osa)  LOC4352538 (osa)  LOC7478888 (ppo)  LOC25499636 (mtr)  LOC100259632 (vvi)  LOC100280179 (zma)  LOC100792664 (gma)  LOC101264980 (sly)  LOC103833512 (bra)  LOC103870840 (bra) 
Subcellular
localization
wolf
chlo 4,  nucl 1,  golg 1,  cyto 1,  mito 1,  plas 1,  extr 1,  cysk_nucl 1,  mito_plas 1,  cyto_plas 1  (predict for NP_001031646.1)
chlo 4,  nucl 1,  golg 1,  cyto 1,  mito 1,  plas 1,  extr 1,  cysk_nucl 1,  mito_plas 1,  cyto_plas 1  (predict for NP_001328785.1)
chlo 4,  nucl 1,  golg 1,  cyto 1,  mito 1,  plas 1,  extr 1,  cysk_nucl 1,  mito_plas 1,  cyto_plas 1  (predict for NP_001328786.1)
chlo 8,  mito 1  (predict for NP_567468.1)
chlo 9,  nucl 1  (predict for NP_974555.1)
Subcellular
localization
TargetP
scret 4  (predict for NP_001031646.1)
scret 4  (predict for NP_001328785.1)
scret 4  (predict for NP_001328786.1)
chlo 8  (predict for NP_567468.1)
chlo 8  (predict for NP_974555.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00860 Porphyrin and chlorophyll metabolism 8
Genes directly connected with PPD1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.8 AT4G24090 homer protein [detail] 828509
6.6 AT4G27700 Rhodanese/Cell cycle control phosphatase superfamily protein [detail] 828884
6.0 CHLI2 magnesium chelatase i2 [detail] 834633
Coexpressed
gene list		 [Coexpressed gene list for PPD1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
245368_at
245368_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
245368_at
245368_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
245368_at
245368_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 827223      
Refseq ID (protein) NP_001031646.1 
NP_001328785.1 
NP_001328786.1 
NP_567468.1 
NP_974555.1 


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