[←][→] ath   AT4G16340 Gene
functional annotation
Function   guanyl-nucleotide exchange factors;GTPase binding;GTP binding protein  
GO BP
GO:0010928 [list] [network] regulation of auxin mediated signaling pathway  (30 genes)  IMP  
GO:0008360 [list] [network] regulation of cell shape  (34 genes)  IMP  
GO:0009958 [list] [network] positive gravitropism  (36 genes)  IMP  
GO:0008064 [list] [network] regulation of actin polymerization or depolymerization  (42 genes)  IMP  
GO:0051493 [list] [network] regulation of cytoskeleton organization  (75 genes)  IMP  
GO:0007264 [list] [network] small GTPase mediated signal transduction  (79 genes)  IEA  
GO:0009734 [list] [network] auxin-activated signaling pathway  (196 genes)  IEA  
GO:0016192 [list] [network] vesicle-mediated transport  (417 genes)  IMP  
GO:0007275 [list] [network] multicellular organism development  (2714 genes)  IEA  
GO CC
GO:0070971 [list] [network] endoplasmic reticulum exit site  (13 genes)  IDA  
GO:0019898 [list] [network] extrinsic component of membrane  (62 genes)  IDA  
GO:0005789 [list] [network] endoplasmic reticulum membrane  (466 genes)  IEA  
GO:0005829 [list] [network] cytosol  (3506 genes)  IDA RCA  
GO:0005886 [list] [network] plasma membrane  (3771 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA ISM  
GO MF
GO:0005089 [list] [network] Rho guanyl-nucleotide exchange factor activity  (16 genes)  IDA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_001319958.1  NP_193367.7 
BLAST NP_001319958.1  NP_193367.7 
Orthologous [Ortholog page] LOC4332718 (osa)  LOC7485423 (ppo)  LOC11405306 (mtr)  LOC100259293 (vvi)  LOC100273928 (zma)  LOC100803721 (gma)  LOC100812785 (gma)  LOC101262837 (sly)  LOC103639174 (zma)  LOC103869750 (bra) 
Subcellular
localization
wolf
chlo 4,  mito 2,  nucl 1,  mito_plas 1,  plas 1,  cysk_nucl 1  (predict for NP_001319958.1)
chlo 4,  mito 2,  nucl 1,  mito_plas 1,  plas 1,  cysk_nucl 1  (predict for NP_193367.7)
Subcellular
localization
TargetP
mito 6,  other 3  (predict for NP_001319958.1)
mito 6,  other 3  (predict for NP_193367.7)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with SPK1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.4 AIR9 Outer arm dynein light chain 1 protein [detail] 818033
8.3 GSL12 glucan synthase-like 12 [detail] 831140
8.1 CLASP CLIP-associated protein [detail] 816539
7.3 SVL1 SHV3-like 1 [detail] 835641
6.6 RDR6 RNA-dependent RNA polymerase 6 [detail] 824112
6.2 AT5G10020 Leucine-rich receptor-like protein kinase family protein [detail] 830865
5.3 AT2G38970 Zinc finger (C3HC4-type RING finger) family protein [detail] 818482
4.6 AT5G23430 Transducin/WD40 repeat-like superfamily protein [detail] 832409
Coexpressed
gene list		 [Coexpressed gene list for SPK1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
245492_at
245492_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
245492_at
245492_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
245492_at
245492_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 827328      
Refseq ID (protein) NP_001319958.1 
NP_193367.7 


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