[←][→] ath   At4g16390 Gene
functional annotation
Function   pentatricopeptide (PPR) repeat-containing protein      
GO BP
GO:0045727 [list] [network] positive regulation of translation  (8 genes)  IMP  
GO:0031425 [list] [network] chloroplast RNA processing  (25 genes)  IMP  
GO:0009658 [list] [network] chloroplast organization  (209 genes)  IMP  
GO CC
GO:0009570 [list] [network] chloroplast stroma  (705 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA IDA ISM  
GO MF
GO:0003729 [list] [network] mRNA binding  (1535 genes)  HDA IDA  
KEGG
Protein NP_193372.6 
BLAST NP_193372.6 
Orthologous [Ortholog page] LOC4332063 (osa)  LOC7474081 (ppo)  LOC7479598 (ppo)  LOC11437309 (mtr)  LOC25486252 (mtr)  LOC25486257 (mtr)  LOC25486258 (mtr)  LOC100794718 (gma)  LOC100795559 (gma)  LOC100813509 (gma)  LOC100818251 (gma)  LOC100818701 (gma)  LOC100819233 (gma)  LOC101258591 (sly)  LOC101264082 (sly)  LOC103849518 (bra)  LOC103869700 (bra)  LOC106794528 (gma)  LOC120578292 (mtr)  LOC123085267 (tae)  LOC123092961 (tae)  LOC123098233 (tae)  LOC123446786 (hvu) 
Subcellular
localization
wolf
chlo 10  (predict for NP_193372.6)
Subcellular
localization
TargetP
chlo 8  (predict for NP_193372.6)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with SVR7 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
11.4 MEE40 Pentatricopeptide repeat (PPR) superfamily protein [detail] 824537
10.1 AT2G41950 DNA-directed RNA polymerase subunit beta [detail] 818795
10.0 AT5G46580 pentatricopeptide (PPR) repeat-containing protein [detail] 834701
9.3 EMB1923 embryo defective 1923 [detail] 828936
8.4 emb1138 DEAD box RNA helicase (RH3) [detail] 832713
8.1 AT5G07900 Mitochondrial transcription termination factor family protein [detail] 830684
7.5 ASE2 GLN phosphoribosyl pyrophosphate amidotransferase 2 [detail] 829626
6.9 AT3G61770 Acid phosphatase/vanadium-dependent haloperoxidase-related protein [detail] 825350
6.6 AT5G20130 sulfate adenylyltransferase subunit [detail] 832135
Coexpressed
gene list		 [Coexpressed gene list for SVR7]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
245494_at
245494_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
245494_at
245494_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
245494_at
245494_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 827333      
Refseq ID (protein) NP_193372.6 


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