[←][→] ath   AT4G16520 Gene
functional annotation
Function   Ubiquitin-like superfamily protein  
GO BP
GO:0006995 [list] [network] cellular response to nitrogen starvation  (33 genes)  IBA  
GO:0006914 [list] [network] autophagy  (55 genes)  IEA  
GO:0015031 [list] [network] protein transport  (724 genes)  IEA  
GO CC
GO:0000421 [list] [network] autophagosome membrane  (13 genes)  IEA  
GO:0005874 [list] [network] microtubule  (186 genes)  IEA  
GO:0031410 [list] [network] cytoplasmic vesicle  (748 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath04136 [list] [network] Autophagy - other (40 genes)
Protein NP_001329226.1  NP_567504.1  NP_849395.1 
BLAST NP_001329226.1  NP_567504.1  NP_849395.1 
Orthologous [Ortholog page] ATG8E (ath)  ATG8B (ath)  APG8A (ath)  ATG8C (ath)  LOC4337052 (osa)  LOC4343365 (osa)  LOC4344857 (osa)  LOC7461702 (ppo)  LOC7463622 (ppo)  LOC7468504 (ppo)  LOC7479209 (ppo)  LOC7489899 (ppo)  LOC11410993 (mtr)  LOC25486170 (mtr)  LOC25492141 (mtr)  LOC100240694 (zma)  LOC100240695 (zma)  LOC100240696 (zma)  LOC100240697 (zma)  LOC100240698 (zma)  LOC100246909 (vvi)  LOC100247055 (vvi)  LOC100258507 (vvi)  LOC100260865 (vvi)  LOC100264435 (vvi)  ATG8d (gma)  LOC100305892 (gma)  LOC100499835 (gma)  LOC100500023 (gma)  LOC100500165 (gma)  ATG8C (gma)  ATG8a (sly)  LOC100736469 (sly)  LOC100784677 (gma)  LOC100818315 (gma)  LOC100818620 (gma)  LOC101246095 (sly)  LOC101251945 (sly)  LOC101253062 (sly)  LOC103839823 (bra)  LOC103847692 (bra)  LOC103858161 (bra)  LOC103859686 (bra)  LOC103860339 (bra)  LOC103861273 (bra) 
Subcellular
localization
wolf
cyto 6,  extr 3,  cyto_pero 3,  cyto_E.R. 3  (predict for NP_001329226.1)
nucl 6,  cysk_nucl 4,  cyto 3  (predict for NP_567504.1)
nucl 6,  cysk_nucl 4,  cyto 3  (predict for NP_849395.1)
Subcellular
localization
TargetP
scret 9,  other 3  (predict for NP_001329226.1)
other 8  (predict for NP_567504.1)
other 8  (predict for NP_849395.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04136 Autophagy - other 5
ath00564 Glycerophospholipid metabolism 2
ath00592 alpha-Linolenic acid metabolism 2
Genes directly connected with ATG8F on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.3 UBC5 ubiquitin-conjugating enzyme 5 [detail] 842683
9.0 AT1G15740 Leucine-rich repeat family protein [detail] 838143
7.5 APG8H Ubiquitin-like superfamily protein [detail] 820798
7.2 AT5G18630 alpha/beta-Hydrolases superfamily protein [detail] 831981
7.2 AT2G04690 Pyridoxamine 5'-phosphate oxidase family protein [detail] 815012
Coexpressed
gene list		 [Coexpressed gene list for ATG8F]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
245391_at
245391_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
245391_at
245391_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
245391_at
245391_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 827351      
Refseq ID (protein) NP_001329226.1 
NP_567504.1 
NP_849395.1 


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