ATTED-II : GeneID search result

[←][→] ath AT4G16640 Gene

functional annotation

Function

Matrixin family protein

GO BP

GO:0030574 [list] [network] collagen catabolic process	(5 genes)	IBA
GO:0030198 [list] [network] extracellular matrix organization	(21 genes)	IBA
GO:0006508 [list] [network] proteolysis	(901 genes)	IEA

GO CC

GO:0031012 [list] [network] extracellular matrix	(20 genes)	IEA
GO:0031225 [list] [network] anchored component of membrane	(303 genes)	TAS
GO:0005576 [list] [network] extracellular region	(3363 genes)	ISM
GO:0005886 [list] [network] plasma membrane	(3771 genes)	IEA

GO MF

GO:0004222 [list] [network] metalloendopeptidase activity	(48 genes)	IBA IDA
GO:0008270 [list] [network] zinc ion binding	(554 genes)	IEA

KEGG

Protein

NP_193397.1

BLAST

NP_193397.1

Orthologous

[Ortholog page] AT2G45040 (ath) LOC4349359 (osa) LOC7471629 (ppo) LOC11436485 (mtr) LOC11442232 (mtr) LOC100251349 (vvi) LOC100255794 (vvi) LOC100781237 (gma) LOC100794001 (gma) LOC100812714 (gma) LOC100816597 (gma) LOC100854810 (vvi) LOC100855190 (vvi) LOC101247669 (sly) LOC101251805 (sly) LOC103637649 (zma) LOC103860876 (bra) LOC103866858 (bra) LOC103869343 (bra)

Subcellular
localization
wolf

plas 6, chlo 1, vacu 1

(predict for NP_193397.1)

Subcellular
localization
TargetP

mito 8, scret 3

(predict for NP_193397.1)

Gene coexpression

Network^*for
coexpressed
genes

Coexpressed
gene list

[Coexpressed gene list for AT4G16640]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

245345_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

245345_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

245345_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	827365
Refseq ID (protein)	NP_193397.1

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