[←][→] ath   AT4G16780 Gene
functional annotation
Function   homeobox protein 2  
GO BP
GO:0080191 [list] [network] secondary thickening  (1 genes)  IMP  
GO:0009641 [list] [network] shade avoidance  (17 genes)  IEP  
GO:0009585 [list] [network] red, far-red light phototransduction  (54 genes)  IEA  
GO:0010218 [list] [network] response to far red light  (54 genes)  IEP  
GO:0010311 [list] [network] lateral root formation  (55 genes)  IMP  
GO:0010017 [list] [network] red or far-red light signaling pathway  (76 genes)  IEP  
GO:0009735 [list] [network] response to cytokinin  (102 genes)  IEP  
GO:0010016 [list] [network] shoot system morphogenesis  (172 genes)  IMP  
GO:0045892 [list] [network] negative regulation of transcription, DNA-templated  (253 genes)  IDA  
GO:0009826 [list] [network] unidimensional cell growth  (279 genes)  IMP  
GO:0009733 [list] [network] response to auxin  (407 genes)  IMP  
GO:0048364 [list] [network] root development  (482 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA ISM  
GO MF
GO:0042803 [list] [network] protein homodimerization activity  (158 genes)  IDA  
GO:0043565 [list] [network] sequence-specific DNA binding  (796 genes)  IDA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1599 genes)  ISS  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_193411.1 
BLAST NP_193411.1 
Orthologous [Ortholog page] THOM1 (sly)  LOC547858 (gma)  HAT1 (ath)  HAT2 (ath)  LOC4336580 (osa)  LOC4340069 (osa)  LOC4340070 (osa)  LOC7471643 (ppo)  LOC7483791 (ppo)  LOC11411907 (mtr)  LOC11438435 (mtr)  LOC25500025 (mtr)  LOC100246436 (vvi)  LOC100264963 (vvi)  LOC100285975 (zma)  LOC100783851 (gma)  LOC100787231 (gma)  LOC100813367 (gma)  LOC101249931 (sly)  LOC101262232 (sly)  LOC101264045 (sly)  LOC103638100 (zma)  LOC103827652 (bra)  LOC103839531 (bra)  LOC103860914 (bra)  LOC103868148 (bra)  LOC103869156 (bra) 
Subcellular
localization
wolf
nucl 10  (predict for NP_193411.1)
Subcellular
localization
TargetP
chlo 8  (predict for NP_193411.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 3
Genes directly connected with HB-2 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.6 PIL1 phytochrome interacting factor 3-like 1 [detail] 819311
6.6 IAA29 indole-3-acetic acid inducible 29 [detail] 829361
6.6 HFR1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein [detail] 839300
6.4 HB4 homeobox-leucine zipper protein 4 [detail] 819100
5.4 CKX5 cytokinin oxidase 5 [detail] 843881
5.2 BIM2 BES1-interacting Myc-like protein 2 [detail] 843233
5.1 BEH4 BES1/BZR1 homolog 4 [detail] 844206
5.0 AT3G16800 Protein phosphatase 2C family protein [detail] 820933
4.1 AT5G02580 argininosuccinate lyase [detail] 831095
Coexpressed
gene list		 [Coexpressed gene list for HB-2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
245276_at
245276_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
245276_at
245276_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
245276_at
245276_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 827384      
Refseq ID (protein) NP_193411.1 


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