| functional annotation |
| Function |
Disease resistance protein (TIR-NBS-LRR class) family |
|
| GO BP |
|
GO:0009409 [list] [network] response to cold
|
(472 genes)
|
IMP
|
 |
|
GO:0050832 [list] [network] defense response to fungus
|
(705 genes)
|
ISS
|
|
|
GO:0007165 [list] [network] signal transduction
|
(2054 genes)
|
IEA
|
|
|
GO:0006952 [list] [network] defense response
|
(2370 genes)
|
TAS
|
|
|
| GO CC |
|
GO:0009507 [list] [network] chloroplast
|
(5004 genes)
|
ISM
|
|
|
GO:0005634 [list] [network] nucleus
|
(10305 genes)
|
ISM
|
|
|
| GO MF |
|
GO:0030275 [list] [network] LRR domain binding
|
(2 genes)
|
ISS
|
|
|
GO:0050135 [list] [network] NAD(P)+ nucleosidase activity
|
(29 genes)
|
IEA
|
|
|
GO:0061809 [list] [network] NAD+ nucleotidase, cyclic ADP-ribose generating
|
(30 genes)
|
IEA
|
|
|
GO:0043531 [list] [network] ADP binding
|
(164 genes)
|
IEA
|
|
|
GO:0005515 [list] [network] protein binding
|
(5066 genes)
|
IPI
|
|
|
| KEGG |
|
|
| Protein |
NP_001328661.1
NP_193420.2
|
| BLAST |
NP_001328661.1
NP_193420.2
|
| Orthologous |
[Ortholog page]
SNC1 (ath)
AT4G16900 (ath)
AT4G16920 (ath)
AT4G16940 (ath)
RPP5 (ath)
AT4G16960 (ath)
LOC103860884 (bra)
|
Subcellular
localization
wolf |
|
cyto 4,
cyto_nucl 4,
nucl 3,
plas 1,
pero 1,
cysk 1,
golg 1,
golg_plas 1,
cysk_plas 1
|
(predict for NP_001328661.1)
|
|
chlo 3,
nucl 3,
cyto 3,
cyto_nucl 3
|
(predict for NP_193420.2)
|
|
Subcellular
localization
TargetP |
|
other 8
|
(predict for NP_001328661.1)
|
|
chlo 4
|
(predict for NP_193420.2)
|
|
| Gene coexpression |
Network*for
coexpressed
genes |
Genes directly connected with RPP4 on the network
| coex z* |
Locus |
Function* |
CoexViewer |
Entrez Gene ID* |
| 18.2 |
RPP5 |
Disease resistance protein (TIR-NBS-LRR class) family |
[detail] |
827403 |
| 15.3 |
SNC1 |
TIR-NBS-LRR class disease resistance protein |
[detail] |
827397 |
| 12.8 |
AT4G16880 |
Leucine-rich repeat (LRR) family protein |
[detail] |
827396 |
| 10.5 |
AT4G16857 |
disease resistance protein (TIR-NBS-LRR class) family protein |
[detail] |
28720138 |
| 10.2 |
AT4G16940 |
Disease resistance protein (TIR-NBS-LRR class) family |
[detail] |
827402 |
| 9.0 |
AT4G16920 |
Disease resistance protein (TIR-NBS-LRR class) family |
[detail] |
827400 |
| 9.0 |
AT1G63880 |
Disease resistance protein (TIR-NBS-LRR class) family |
[detail] |
842692 |
| 8.4 |
AT4G16960 |
disease resistance protein (TIR-NBS-LRR class) |
[detail] |
827404 |
| 7.6 |
SNC4 |
suppressor of npr1-1 constitutive 4 |
[detail] |
843016 |
| 6.6 |
AT5G43440 |
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
[detail] |
834364 |
|
Coexpressed
gene list |
[Coexpressed gene list for RPP4]
|
| Gene expression |
| All samples |
[Expression pattern for all samples]
|
AtGenExpress*
(Development) |
245448_at
X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.
|
AtGenExpress*
(Stress) |
245448_at
X axis is samples (pdf file), and Y axis is log2-expression.
|
AtGenExpress*
(Hormone) |
245448_at
X axis is samples (xls file), and Y axis is log-expression.
|
At4g16860 Gene
