[←][→] ath   At4g16990 Gene
functional annotation
Function   disease resistance protein (TIR-NBS class)    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:2000071 [list] [network] regulation of defense response by callose deposition  (5 genes)  IMP  
GO:0009861 [list] [network] jasmonic acid and ethylene-dependent systemic resistance  (18 genes)  IMP  
GO:0050832 [list] [network] defense response to fungus  (705 genes)  IMP  
GO:0007165 [list] [network] signal transduction  (2054 genes)  IEA  
GO:0006952 [list] [network] defense response  (2370 genes)  IEA  
GO CC
GO:0005829 [list] [network] cytosol  (2559 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5004 genes)  ISM  
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  ISM  
GO MF
GO:0050135 [list] [network] NAD(P)+ nucleosidase activity  (29 genes)  IEA  
GO:0061809 [list] [network] NAD+ nucleotidase, cyclic ADP-ribose generating  (30 genes)  IEA  
GO:0043531 [list] [network] ADP binding  (164 genes)  IEA  
GO:0003729 [list] [network] mRNA binding  (1535 genes)  IDA  
KEGG
Protein NP_001031652.1  NP_001319972.1  NP_001319973.1  NP_001329871.1  NP_001329872.1  NP_001329873.1  NP_001329874.1  NP_001329875.1  NP_001329876.1  NP_001329877.1  NP_001329878.1  NP_001329879.1  NP_001329880.1  NP_001329881.1  NP_001329882.1  NP_001329883.1  NP_193432.4  NP_849399.1  NP_849400.2 
BLAST NP_001031652.1  NP_001319972.1  NP_001319973.1  NP_001329871.1  NP_001329872.1  NP_001329873.1  NP_001329874.1  NP_001329875.1  NP_001329876.1  NP_001329877.1  NP_001329878.1  NP_001329879.1  NP_001329880.1  NP_001329881.1  NP_001329882.1  NP_001329883.1  NP_193432.4  NP_849399.1  NP_849400.2 
Orthologous
Subcellular
localization
wolf
nucl 5,  cyto 1,  pero 1,  cyto_pero 1  (predict for NP_001031652.1)
nucl 7,  cyto 1,  vacu 1,  pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_001319972.1)
nucl 5,  cyto 1,  pero 1,  cyto_pero 1  (predict for NP_001319973.1)
nucl 4,  cyto 4,  cyto_nucl 4  (predict for NP_001329871.1)
nucl 5,  cyto 1,  pero 1,  cyto_pero 1  (predict for NP_001329872.1)
nucl 7,  cyto 1,  vacu 1,  pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_001329873.1)
nucl 7,  cyto 1,  vacu 1,  pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_001329874.1)
nucl 8,  cyto 1  (predict for NP_001329875.1)
nucl 4,  cyto 4,  cyto_nucl 4  (predict for NP_001329876.1)
nucl 7,  cyto 1,  vacu 1,  pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_001329877.1)
nucl 5,  cyto 1,  pero 1,  cyto_pero 1  (predict for NP_001329878.1)
nucl 5,  cyto 1,  pero 1,  cyto_pero 1  (predict for NP_001329879.1)
chlo 2,  nucl 2,  cyto 2,  cyto_nucl 2,  mito 1,  cysk 1  (predict for NP_001329880.1)
nucl 8,  chlo 1,  cyto 1,  vacu 1  (predict for NP_001329881.1)
nucl 8,  cyto 1  (predict for NP_001329882.1)
nucl 7,  cyto 1,  vacu 1,  pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_001329883.1)
nucl 8,  cyto 1  (predict for NP_193432.4)
nucl 7,  cyto 1,  vacu 1,  pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_849399.1)
nucl 5,  cyto 1,  pero 1,  cyto_pero 1  (predict for NP_849400.2)
Subcellular
localization
TargetP
other 7,  scret 3  (predict for NP_001031652.1)
other 6  (predict for NP_001319972.1)
other 7,  scret 3  (predict for NP_001319973.1)
other 7,  scret 3  (predict for NP_001329871.1)
other 7,  scret 3  (predict for NP_001329872.1)
other 6  (predict for NP_001329873.1)
other 6  (predict for NP_001329874.1)
other 6  (predict for NP_001329875.1)
other 7,  scret 3  (predict for NP_001329876.1)
other 6  (predict for NP_001329877.1)
other 7,  scret 3  (predict for NP_001329878.1)
other 7,  scret 3  (predict for NP_001329879.1)
other 8  (predict for NP_001329880.1)
other 8  (predict for NP_001329881.1)
other 6  (predict for NP_001329882.1)
other 6  (predict for NP_001329883.1)
other 6  (predict for NP_193432.4)
other 6  (predict for NP_849399.1)
other 7,  scret 3  (predict for NP_849400.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with RLM3 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
5.4 AT5G46450 Disease resistance protein (TIR-NBS-LRR class) family [detail] 834688
5.2 SNC4 suppressor of npr1-1 constitutive 4 [detail] 843016
5.0 AT3G45260 C2H2-like zinc finger protein [detail] 823664
4.8 PLC8 phosphatidylinositol-speciwc phospholipase C8 [detail] 823882
Coexpressed
gene list		 [Coexpressed gene list for RLM3]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
245460_at
245460_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
245460_at
245460_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
245460_at
245460_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 827407      
Refseq ID (protein) NP_001031652.1 
NP_001319972.1 
NP_001319973.1 
NP_001329871.1 
NP_001329872.1 
NP_001329873.1 
NP_001329874.1 
NP_001329875.1 
NP_001329876.1 
NP_001329877.1 
NP_001329878.1 
NP_001329879.1 
NP_001329880.1 
NP_001329881.1 
NP_001329882.1 
NP_001329883.1 
NP_193432.4 
NP_849399.1 
NP_849400.2 


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