[←][→] ath   AT4G17040 Gene
functional annotation
Function   CLP protease R subunit 4  
GO BP
GO:0006515 [list] [network] protein quality control for misfolded or incompletely synthesized proteins  (27 genes)  IBA  
GO:0000302 [list] [network] response to reactive oxygen species  (152 genes)  IMP  
GO:0010468 [list] [network] regulation of gene expression  (2484 genes)  IMP  
GO CC
GO:0009368 [list] [network] endopeptidase Clp complex  (9 genes)  IBA  
GO:0009941 [list] [network] chloroplast envelope  (666 genes)  IDA  
GO:0009570 [list] [network] chloroplast stroma  (750 genes)  IDA  
GO:0009532 [list] [network] plastid stroma  (757 genes)  IDA  
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  HDA IDA ISM  
GO:0009536 [list] [network] plastid  (5519 genes)  IDA  
GO MF
GO:0051117 [list] [network] ATPase binding  (15 genes)  IBA  
GO:0004176 [list] [network] ATP-dependent peptidase activity  (30 genes)  IBA  
GO:0004252 [list] [network] serine-type endopeptidase activity  (93 genes)  IBA  
KEGG
Protein NP_567521.1 
BLAST NP_567521.1 
Orthologous [Ortholog page] LOC4325168 (osa)  LOC25493594 (mtr)  LOC100272400 (zma)  LOC100780029 (gma)  LOC100785827 (gma)  LOC100852416 (vvi)  LOC100855178 (vvi)  LOC101247052 (sly)  LOC103860891 (bra)  LOC103868942 (bra) 
Subcellular
localization
wolf
chlo 5,  mito 5,  chlo_mito 5  (predict for NP_567521.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_567521.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with CLPR4 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
10.1 CLPP5 nuclear encoded CLP protease 5 [detail] 839433
9.1 CLPP6 CLP protease proteolytic subunit 6 [detail] 837719
9.0 CLP2 CLP protease proteolytic subunit 2 [detail] 837797
8.6 AT1G09130 ATP-dependent caseinolytic (Clp) protease/crotonase family protein [detail] 837432
8.6 CDF1 cell growth defect factor-like protein (DUF3353) [detail] 832368
7.9 AT1G36320 hypothetical protein [detail] 840539
7.3 AT3G10970 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein [detail] 820268
6.0 MSRB2 methionine sulfoxide reductase B 2 [detail] 828274
Coexpressed
gene list		 [Coexpressed gene list for CLPR4]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
245400_at
245400_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
245400_at
245400_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
245400_at
245400_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 827412      
Refseq ID (protein) NP_567521.1 


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