[][] ath   At4g17090 Gene
functional annotation
Function   chloroplast beta-amylase
GO BP
GO:0000024 [list] [network] maltose biosynthetic process  (1 genes)  IMP  
GO:0005983 [list] [network] starch catabolic process  (17 genes)  IDA IMP TAS  
GO:0009409 [list] [network] response to cold  (472 genes)  IEP  
GO CC
GO:0009570 [list] [network] chloroplast stroma  (705 genes)  IDA  
GO:0005829 [list] [network] cytosol  (2559 genes)  HDA  
GO:0005576 [list] [network] extracellular region  (3154 genes)  ISM  
GO MF
GO:0102229 [list] [network] amylopectin maltohydrolase activity  (8 genes)  IEA  
GO:0016161 [list] [network] beta-amylase activity  (9 genes)  IDA  
KEGG ath00500 [list] [network] Starch and sucrose metabolism (172 genes)
Protein NP_567523.1 
BLAST NP_567523.1 
Orthologous [Ortholog page] BMY2 (gma)LOC4349417 (osa)LOC11438460 (mtr)LOC11439428 (mtr)LOC18096774 (ppo)LOC18096911 (ppo)LOC25493571 (mtr)LOC100784912 (gma)LOC100786079 (gma)LOC100818063 (gma)LOC101253815 (sly)LOC101259175 (sly)LOC103860895 (bra)LOC103868361 (bra)LOC123052101 (tae)LOC123128167 (tae)LOC123181646 (tae)LOC123439066 (hvu)
Subcellular
localization
wolf
nucl 4,  chlo 2,  mito 2,  chlo_mito 2,  cysk_nucl 2  (predict for NP_567523.1)
Subcellular
localization
TargetP
chlo 7,  other 3  (predict for NP_567523.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00730 Thiamine metabolism 2
ath01240 Biosynthesis of cofactors 2
Genes directly connected with CT-BMY on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
5.4 THIC thiaminC [detail] 817513
4.9 AT1G51090 Heavy metal transport/detoxification superfamily protein [detail] 841532
4.8 AT1G78995 uncharacterized protein [detail] 844240
4.6 NHL12 NDR1/HIN1-like 12 [detail] 818169
3.5 AT5G44565 uncharacterized protein [detail] 2746190
Coexpressed
gene list
[Coexpressed gene list for CT-BMY]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
245346_at
245346_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
245346_at
245346_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
245346_at
245346_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 827419    
Refseq ID (protein) NP_567523.1 


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