[][] ath   At4g18130 Gene
functional annotation
Function   phytochrome E Plant GARDENPlant GARDEN JBrowse
GO BP
GO:0009584 [list] [network] detection of visible light  (5 genes)  IEA  
GO:0017006 [list] [network] protein-tetrapyrrole linkage  (7 genes)  IEA  
GO:0009585 [list] [network] red, far-red light phototransduction  (20 genes)  IEA  
GO:0006325 [list] [network] chromatin organization  (210 genes)  IEA  
GO:0010228 [list] [network] vegetative to reproductive phase transition of meristem  (287 genes)  IEA  
GO:0010629 [list] [network] negative regulation of gene expression  (396 genes)  IEA  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1656 genes)  IEA  
GO:0009888 [list] [network] tissue development  (1806 genes)  IEA  
GO:0009416 [list] [network] response to light stimulus  (1981 genes)  IEA  
GO CC
GO:0005886 [list] [network] plasma membrane  (2529 genes)  ISM  
GO MF
GO:0000155 [list] [network] phosphorelay sensor kinase activity  (14 genes)  IEA  
GO:0004673 [list] [network] protein histidine kinase activity  (17 genes)  ISS  
GO:0042803 [list] [network] protein homodimerization activity  (227 genes)  IEA  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_193547.4 
BLAST NP_193547.4 
Orthologous [Ortholog page] PHYB (ath)PHYD (ath)LOC4332623 (osa)LOC7485825 (ppo)LOC7485902 (ppo)LOC11417317 (mtr)LOC11420025 (mtr)LOC100137004 (tae)LOC100794865 (gma)PHYB (gma)PHYE2 (gma)PHYE1 (gma)PHYE (sly)PHYB1 (sly)PHYB2 (sly)LOC103856075 (bra)LOC103869720 (bra)LOC123092340 (tae)LOC123097663 (tae)LOC123448812 (hvu)
Subcellular
localization
wolf
cyto 5,  nucl 4,  mito 1,  cysk 1  (predict for NP_193547.4)
Subcellular
localization
TargetP
other 5  (predict for NP_193547.4)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with PHYE on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
6.8 AT1G77800 PHD finger family protein [detail] 844117
5.8 PERK10 proline-rich extensin-like receptor kinase 10 [detail] 839156
5.2 AT2G03140 alpha/beta-Hydrolases superfamily protein [detail] 814843
Coexpressed
gene list
[Coexpressed gene list for PHYE]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
254680_at
254680_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
254680_at
254680_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
254680_at
254680_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 827538    
Refseq ID (protein) NP_193547.4 


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