[←][→] ath   AT4G18130 Gene
functional annotation
Function   phytochrome E  
GO BP
GO:0009584 [list] [network] detection of visible light  (5 genes)  IEA  
GO:0017006 [list] [network] protein-tetrapyrrole linkage  (7 genes)  IEA  
GO:0018298 [list] [network] protein-chromophore linkage  (38 genes)  IEA  
GO:0009585 [list] [network] red, far-red light phototransduction  (54 genes)  IEA  
GO:0006355 [list] [network] regulation of transcription, DNA-templated  (1984 genes)  IEA  
GO CC
GO:0005886 [list] [network] plasma membrane  (3771 genes)  ISM  
GO:0005634 [list] [network] nucleus  (10793 genes)  IBA  
GO MF
GO:0000155 [list] [network] phosphorelay sensor kinase activity  (16 genes)  IEA  
GO:0009881 [list] [network] photoreceptor activity  (16 genes)  IEA  
GO:0004673 [list] [network] protein histidine kinase activity  (17 genes)  ISS  
GO:0042803 [list] [network] protein homodimerization activity  (158 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_193547.4 
BLAST NP_193547.4 
Orthologous [Ortholog page] PHYB (ath)  PHYD (ath)  LOC4332623 (osa)  LOC7485825 (ppo)  LOC7485902 (ppo)  LOC11417317 (mtr)  LOC11420025 (mtr)  LOC100261882 (vvi)  PHYE (vvi)  LOC100381811 (zma)  LOC100383702 (zma)  PHYB (gma)  PHYE2 (gma)  PHYE1 (gma)  PHYE (sly)  PHYB1 (sly)  PHYB2 (sly)  LOC103856075 (bra)  LOC103869720 (bra) 
Subcellular
localization
wolf
cyto 5,  nucl 4,  mito 1,  cysk 1  (predict for NP_193547.4)
Subcellular
localization
TargetP
other 5  (predict for NP_193547.4)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with PHYE on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.7 AT1G77800 PHD finger family protein [detail] 844117
4.8 G2484-1 G2484-1 protein [detail] 827445
4.8 RGD3 ROOT GROWTH DEFECTIVE 3 [detail] 824595
Coexpressed
gene list		 [Coexpressed gene list for PHYE]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
254680_at
254680_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
254680_at
254680_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
254680_at
254680_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 827538      
Refseq ID (protein) NP_193547.4 


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