ATTED-II : GeneID search result

[←][→] ath At4g18520 Gene

functional annotation

Function

Pentatricopeptide repeat (PPR) superfamily protein

GO BP

GO:1900865 [list] [network] chloroplast RNA modification	(18 genes)	IMP
GO:0008380 [list] [network] RNA splicing	(191 genes)	IMP

GO CC

GO:0009507 [list] [network] chloroplast

(5004 genes)

IDA IMP ISM

GO MF

GO:0003729 [list] [network] mRNA binding	(1535 genes)	IDA
GO:0005515 [list] [network] protein binding	(5066 genes)	IPI

KEGG

Protein

NP_193587.4

BLAST

NP_193587.4

Orthologous

[Ortholog page] LOC9269748 (osa) LOC11445954 (mtr) LOC18099514 (ppo) LOC100806316 (gma) LOC101247638 (sly) LOC103861000 (bra) LOC123102197 (tae) LOC123110364 (tae) LOC123119392 (tae) LOC123398477 (hvu)

Subcellular
localization
wolf

chlo 2, cyto 2, mito 2, chlo_mito 2, nucl 1, plas 1, nucl_plas 1

(predict for NP_193587.4)

Subcellular
localization
TargetP

chlo 5

(predict for NP_193587.4)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with AT4G18520 on the network
coex z^*	Locus	Function^*	CoexViewer	Entrez Gene ID^*
8.4	AT1G67660	Restriction endonuclease, type II-like superfamily protein	[detail]	843091
6.1	AT1G71060	Tetratricopeptide repeat (TPR)-like superfamily protein	[detail]	843446
6.0	AT4G18530	lysine ketoglutarate reductase trans-splicing-like protein, putative (DUF707)	[detail]	827585

Coexpressed
gene list

[Coexpressed gene list for AT4G18520]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

254645_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

254645_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

254645_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	827584
Refseq ID (protein)	NP_193587.4

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