ATTED-II : GeneID search result

[←][→] ath AT4G19520 Gene

functional annotation

Function

disease resistance protein (TIR-NBS-LRR class) family

GO BP

GO:0071456 [list] [network] cellular response to hypoxia

(238 genes)

IEP

GO CC

GO:0005634 [list] [network] nucleus	(10793 genes)	IBA
GO:0005737 [list] [network] cytoplasm	(14855 genes)	ISM

GO MF

GO:0043565 [list] [network] sequence-specific DNA binding	(796 genes)	IBA
GO:0044212 [list] [network] transcription regulatory region DNA binding	(871 genes)	IBA
GO:0003700 [list] [network] DNA-binding transcription factor activity	(1599 genes)	IBA

KEGG

Protein

NP_001329580.1 NP_001329581.1 NP_001329582.1 NP_001329583.1 NP_193687.3

BLAST

NP_001329580.1 NP_001329581.1 NP_001329582.1 NP_001329583.1 NP_193687.3

Orthologous

Subcellular
localization
wolf

nucl 7, cyto 3	(predict for NP_001329580.1)
nucl 7, cyto 3	(predict for NP_001329581.1)
nucl 6, cyto 3	(predict for NP_001329582.1)
nucl 7, cyto 3	(predict for NP_001329583.1)
nucl 7, cyto 1, plas 1, vacu 1, cyto_pero 1, cyto_E.R. 1	(predict for NP_193687.3)

Subcellular
localization
TargetP

other 8	(predict for NP_001329580.1)
other 8	(predict for NP_001329581.1)
other 8	(predict for NP_001329582.1)
other 8	(predict for NP_001329583.1)
other 8	(predict for NP_193687.3)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with AT4G19520 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
17.7	AT4G19530	disease resistance protein (TIR-NBS-LRR class) family	[detail]	827695
11.7	AT4G19500	nucleoside-triphosphatase/transmembrane receptor/nucleotide binding/ATP binding protein	[detail]	827691
11.5	VPS54	VPS54	[detail]	827690

Coexpressed
gene list

[Coexpressed gene list for AT4G19520]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

254587_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

254587_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

254587_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	827694
Refseq ID (protein)	NP_001329580.1
	NP_001329581.1
	NP_001329582.1
	NP_001329583.1
	NP_193687.3

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