[←][→] ath   At4g20090 Gene
functional annotation
Function   Pentatricopeptide repeat (PPR) superfamily protein      
GO BP
GO:0009793 [list] [network] embryo development ending in seed dormancy  (697 genes)  IMP NAS  
GO CC
GO:0009507 [list] [network] chloroplast  (5004 genes)  ISM  
GO MF
KEGG
Protein NP_001320003.1  NP_193742.1 
BLAST NP_001320003.1  NP_193742.1 
Orthologous [Ortholog page] LOC7465363 (ppo)  LOC7491468 (ppo)  LOC9268066 (osa)  LOC11444332 (mtr)  LOC100801994 (gma)  LOC101253553 (sly)  LOC103857964 (bra)  LOC123168566 (tae)  LOC123411413 (hvu) 
Subcellular
localization
wolf
chlo 6,  chlo_mito 4,  extr 1,  vacu 1,  cyto_nucl 1  (predict for NP_001320003.1)
chlo 6,  chlo_mito 4,  extr 1,  vacu 1,  cyto_nucl 1  (predict for NP_193742.1)
Subcellular
localization
TargetP
chlo 6  (predict for NP_001320003.1)
chlo 6  (predict for NP_193742.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with EMB1025 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
10.7 AT2G26790 Pentatricopeptide repeat (PPR) superfamily protein [detail] 817220
10.5 EMB3131 Pentatricopeptide repeat (PPR-like) superfamily protein [detail] 827823
10.0 AT2G01740 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 814704
9.4 AT4G26800 Pentatricopeptide repeat (PPR) superfamily protein [detail] 828787
9.4 AT1G06710 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 837181
9.2 AT3G06920 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 819877
9.2 AT1G13630 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 837924
8.3 RPD1 Ubiquitin carboxyl-terminal hydrolase family protein [detail] 829487
5.9 emb2739 embryo defective 2739 [detail] 827107
Coexpressed
gene list		 [Coexpressed gene list for EMB1025]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
254498_at
254498_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
254498_at
254498_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
254498_at
254498_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 827754      
Refseq ID (protein) NP_001320003.1 
NP_193742.1 


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