[][] ath   AT4G21110 Gene
functional annotation
Function   G10 family protein
GO BP
GO:0000398 [list] [network] mRNA splicing, via spliceosome  (172 genes)  IBA  
GO CC
GO:0005681 [list] [network] spliceosomal complex  (142 genes)  IBA  
GO:0005829 [list] [network] cytosol  (3506 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
KEGG ath03040 [list] [network] Spliceosome (192 genes)
Protein NP_001329615.1  NP_193843.1 
BLAST NP_001329615.1  NP_193843.1 
Orthologous [Ortholog page] LOC4324760 (osa)LOC4337198 (osa)LOC4338942 (osa)LOC4351510 (osa)LOC7478630 (ppo)LOC11409732 (mtr)LOC25494003 (mtr)LOC100191203 (zma)LOC100256218 (vvi)LOC100282560 (zma)LOC100305597 (gma)LOC100527276 (gma)LOC100814888 (gma)LOC101250862 (sly)LOC101264965 (sly)LOC103636462 (zma)LOC103834203 (bra)LOC103858732 (bra)LOC103861214 (bra)LOC109939167 (zma)
Subcellular
localization
wolf
nucl 4,  mito 3,  cyto 2,  cysk_nucl 2  (predict for NP_001329615.1)
nucl 4,  mito 3,  cyto 2,  cysk_nucl 2  (predict for NP_193843.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001329615.1)
other 9  (predict for NP_193843.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 5
ath03010 Ribosome 2
Genes directly connected with AT4G21110 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
6.3 HTA9 histone H2A protein 9 [detail] 841707
6.2 EMB2769 Cwf15 / Cwc15 cell cycle control family protein [detail] 820510
6.1 EIF3K eukaryotic translation initiation factor 3K [detail] 829461
5.7 TAF13 TBP-associated factor 13 [detail] 837962
5.2 NRPB8B RNA polymerase Rpb8 [detail] 825129
Coexpressed
gene list
[Coexpressed gene list for AT4G21110]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
254399_at
254399_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
254399_at
254399_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
254399_at
254399_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 827859    
Refseq ID (protein) NP_001329615.1 
NP_193843.1 


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