[←][→] ath   AT4G21280 Gene
functional annotation
Function   photosystem II subunit QA  
GO BP
GO:0009767 [list] [network] photosynthetic electron transport chain  (35 genes)  IBA  
GO CC
GO:0009654 [list] [network] photosystem II oxygen evolving complex  (21 genes)  IEA  
GO:0009543 [list] [network] chloroplast thylakoid lumen  (59 genes)  IDA  
GO:0019898 [list] [network] extrinsic component of membrane  (62 genes)  IEA  
GO:0031977 [list] [network] thylakoid lumen  (72 genes)  IDA  
GO:0009535 [list] [network] chloroplast thylakoid membrane  (373 genes)  IDA  
GO:0009534 [list] [network] chloroplast thylakoid  (474 genes)  IDA  
GO:0009579 [list] [network] thylakoid  (543 genes)  IDA  
GO:0009570 [list] [network] chloroplast stroma  (750 genes)  IDA  
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  HDA IBA IDA ISM  
GO MF
GO:0045156 [list] [network] electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity  (6 genes)  IBA  
GO:0005509 [list] [network] calcium ion binding  (242 genes)  IEA  
KEGG ath00195 [list] [network] Photosynthesis (76 genes)
Protein NP_001031687.1  NP_193860.1 
BLAST NP_001031687.1  NP_193860.1 
Orthologous [Ortholog page] LOC542279 (zma)  PsbQ (sly)  PSBQ-2 (ath)  LOC4343515 (osa)  LOC7490773 (ppo)  LOC7495298 (ppo)  LOC25499987 (mtr)  LOC100240959 (vvi)  LOC100306034 (gma)  LOC100499794 (gma)  LOC103647735 (zma)  LOC103839762 (bra)  LOC103858917 (bra) 
Subcellular
localization
wolf
chlo 5,  mito 3,  cyto 1,  cyto_mito 1,  mito_plas 1  (predict for NP_001031687.1)
chlo 5,  mito 3,  cyto 1,  cyto_mito 1,  mito_plas 1  (predict for NP_193860.1)
Subcellular
localization
TargetP
chlo 8  (predict for NP_001031687.1)
chlo 8  (predict for NP_193860.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00195 Photosynthesis 13
ath00196 Photosynthesis - antenna proteins 2
ath00190 Oxidative phosphorylation 2
Genes directly connected with PSBQA on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
15.5 DRT112 Cupredoxin superfamily protein [detail] 838622
15.1 PSAK photosystem I subunit K [detail] 839918
14.0 PSBP-1 photosystem II subunit P-1 [detail] 837178
10.0 ATPD F-type H+-transporting ATPase subunit delta [detail] 826551
9.0 PSB27 photosystem II family protein [detail] 839449
Coexpressed
gene list		 [Coexpressed gene list for PSBQA]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
254398_at
254398_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
254398_at
254398_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
254398_at
254398_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 827877      
Refseq ID (protein) NP_001031687.1 
NP_193860.1 


The preparation time of this page was 0.5 [sec].