[←][→] ath   At4g21560 Gene
functional annotation
Function   vacuolar protein sorting-associated protein-like protein      
GO BP
GO:0009738 [list] [network] abscisic acid-activated signaling pathway  (159 genes)  IEA  
GO CC
GO:0000813 [list] [network] ESCRT I complex  (7 genes)  ISS  
GO:0005802 [list] [network] trans-Golgi network  (268 genes)  IDA  
GO:0005794 [list] [network] Golgi apparatus  (1182 genes)  IDA  
GO:0005829 [list] [network] cytosol  (2559 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG ath04144 [list] [network] Endocytosis (158 genes)
Protein NP_001320024.1  NP_193887.1  NP_974585.1 
BLAST NP_001320024.1  NP_193887.1  NP_974585.1 
Orthologous [Ortholog page] VPS28-2 (ath)  LOC4327840 (osa)  LOC7494341 (ppo)  LOC7495265 (ppo)  LOC11439388 (mtr)  LOC100500366 (gma)  LOC100814037 (gma)  LOC101255562 (sly)  LOC101258121 (sly)  LOC103834189 (bra)  LOC103839783 (bra)  LOC103859151 (bra)  LOC123062252 (tae)  LOC123071007 (tae)  LOC123079382 (tae) 
Subcellular
localization
wolf
chlo 4,  nucl_plas 3,  nucl 3,  plas 2,  cyto 1  (predict for NP_001320024.1)
chlo 4,  nucl_plas 3,  nucl 3,  plas 2,  cyto 1  (predict for NP_193887.1)
chlo 4,  nucl_plas 3,  nucl 3,  plas 2,  cyto 1  (predict for NP_974585.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001320024.1)
other 9  (predict for NP_193887.1)
other 9  (predict for NP_974585.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with VPS28-1 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
7.6 AT3G45040 phosphatidate cytidylyltransferase family protein [detail] 823639
6.9 AT3G29170 transmembrane protein (DUF872) [detail] 822567
6.5 DER2.2 DERLIN-2.2 [detail] 825823
6.2 SAP7 A20/AN1-like zinc finger family protein [detail] 826812
6.1 AT5G48655 RING/U-box superfamily protein [detail] 834923
5.9 AT5G15260 ribosomal protein L34e superfamily protein [detail] 831378
Coexpressed
gene list		 [Coexpressed gene list for VPS28-1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
254422_at
254422_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
254422_at
254422_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
254422_at
254422_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 828241      
Refseq ID (protein) NP_001320024.1 
NP_193887.1 
NP_974585.1 


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