[←][→] ath   AT4G21980 Gene
functional annotation
Function   Ubiquitin-like superfamily protein  
GO BP
GO:0006914 [list] [network] autophagy  (55 genes)  IEA ISS  
GO:0050832 [list] [network] defense response to fungus  (517 genes)  IEP  
GO:0015031 [list] [network] protein transport  (724 genes)  IEA  
GO CC
GO:0005775 [list] [network] vacuolar lumen  (5 genes)  NAS  
GO:0061908 [list] [network] phagophore  (6 genes)  IPI  
GO:0000421 [list] [network] autophagosome membrane  (13 genes)  IEA  
GO:0005776 [list] [network] autophagosome  (21 genes)  IDA IPI  
GO:0005874 [list] [network] microtubule  (186 genes)  IEA  
GO:0031410 [list] [network] cytoplasmic vesicle  (748 genes)  IEA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  ISM  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IDA NAS  
GO MF
GO:0019786 [list] [network] Atg8-specific protease activity  (2 genes)  ISS  
GO:0019779 [list] [network] Atg8 activating enzyme activity  (3 genes)  ISS  
GO:0019776 [list] [network] Atg8 ligase activity  (4 genes)  ISS  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath04136 [list] [network] Autophagy - other (40 genes)
Protein NP_001078424.1  NP_567642.1 
BLAST NP_001078424.1  NP_567642.1 
Orthologous [Ortholog page] ATG8E (ath)  ATG8B (ath)  ATG8F (ath)  ATG8C (ath)  LOC4337052 (osa)  LOC4343365 (osa)  LOC4344857 (osa)  LOC7461702 (ppo)  LOC7463622 (ppo)  LOC7468504 (ppo)  LOC7479209 (ppo)  LOC7489899 (ppo)  LOC11410993 (mtr)  LOC25486170 (mtr)  LOC25492141 (mtr)  LOC100240694 (zma)  LOC100240695 (zma)  LOC100240696 (zma)  LOC100240697 (zma)  LOC100240698 (zma)  LOC100246909 (vvi)  LOC100247055 (vvi)  LOC100258507 (vvi)  LOC100260865 (vvi)  LOC100264435 (vvi)  ATG8d (gma)  LOC100305892 (gma)  LOC100499835 (gma)  LOC100500023 (gma)  LOC100500165 (gma)  ATG8C (gma)  ATG8a (sly)  LOC100736469 (sly)  LOC100784677 (gma)  LOC100818315 (gma)  LOC100818620 (gma)  LOC101246095 (sly)  LOC101251945 (sly)  LOC101253062 (sly)  LOC103839823 (bra)  LOC103847692 (bra)  LOC103858161 (bra)  LOC103859686 (bra)  LOC103860339 (bra)  LOC103861273 (bra) 
Subcellular
localization
wolf
cyto 8,  chlo 1  (predict for NP_001078424.1)
cyto 7,  nucl 3  (predict for NP_567642.1)
Subcellular
localization
TargetP
chlo 4,  scret 3  (predict for NP_001078424.1)
other 5  (predict for NP_567642.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04136 Autophagy - other 7
Genes directly connected with APG8A on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.1 ATG8C Ubiquitin-like superfamily protein [detail] 842499
7.5 APG8H Ubiquitin-like superfamily protein [detail] 820798
7.1 ATG8H Ubiquitin-like superfamily protein [detail] 819816
6.9 AT4G27745 Yippee family putative zinc-binding protein [detail] 3770406
6.0 ATG8B Ubiquitin-like superfamily protein [detail] 825794
5.5 AT2G01540 Calcium-dependent lipid-binding (CaLB domain) family protein [detail] 814683
5.3 AT5G49710 RING finger protein [detail] 835034
5.0 TRX5 thioredoxin H-type 5 [detail] 841082
4.0 TY1 thioredoxin Y1 [detail] 844010
Coexpressed
gene list		 [Coexpressed gene list for APG8A]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
254346_at
254346_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
254346_at
254346_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
254346_at
254346_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 828287      
Refseq ID (protein) NP_001078424.1 
NP_567642.1 


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