[←][→] ath   AT4G22890 Gene
functional annotation
Function   PGR5-LIKE A  
GO BP
GO:0009773 [list] [network] photosynthetic electron transport in photosystem I  (16 genes)  IBA IGI IMP  
GO:0015979 [list] [network] photosynthesis  (206 genes)  IGI  
GO CC
GO:0009535 [list] [network] chloroplast thylakoid membrane  (373 genes)  IBA IDA  
GO:0009534 [list] [network] chloroplast thylakoid  (474 genes)  IDA  
GO:0009579 [list] [network] thylakoid  (543 genes)  IDA  
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA  
GO:0005739 [list] [network] mitochondrion  (4405 genes)  ISM  
GO:0016021 [list] [network] integral component of membrane  (4803 genes)  IEA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  IDA ISM  
GO MF
GO:0016730 [list] [network] oxidoreductase activity, acting on iron-sulfur proteins as donors  (8 genes)  IBA IDA  
GO:0042802 [list] [network] identical protein binding  (288 genes)  IPI  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_001078431.1  NP_001078432.1  NP_001320036.1  NP_567672.1  NP_849423.1 
BLAST NP_001078431.1  NP_001078432.1  NP_001320036.1  NP_567672.1  NP_849423.1 
Orthologous [Ortholog page] PGRL1B (ath)  LOC4334845 (osa)  LOC4346096 (osa)  LOC7479243 (ppo)  LOC11436266 (mtr)  LOC25493634 (mtr)  LOC100242824 (vvi)  LOC100273908 (zma)  LOC100784314 (gma)  LOC100785186 (gma)  LOC100810598 (gma)  LOC101247736 (sly)  LOC101251312 (sly)  LOC103632242 (zma)  LOC103858614 (bra)  LOC103860435 (bra)  LOC103861343 (bra) 
Subcellular
localization
wolf
chlo 4,  chlo_mito 4,  mito 2,  plas 1,  E.R. 1,  E.R._plas 1  (predict for NP_001078431.1)
chlo 4,  chlo_mito 4,  mito 2,  plas 1,  E.R. 1,  E.R._plas 1  (predict for NP_001078432.1)
chlo 5,  chlo_mito 4,  mito 2,  E.R. 1  (predict for NP_001320036.1)
chlo 4,  chlo_mito 4,  mito 2,  plas 1,  E.R. 1,  E.R._plas 1  (predict for NP_567672.1)
chlo 4,  chlo_mito 4,  mito 2,  plas 1,  E.R. 1,  E.R._plas 1  (predict for NP_849423.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_001078431.1)
chlo 9  (predict for NP_001078432.1)
chlo 9  (predict for NP_001320036.1)
chlo 9  (predict for NP_567672.1)
chlo 9  (predict for NP_849423.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00630 Glyoxylate and dicarboxylate metabolism 3
ath00910 Nitrogen metabolism 2
ath01230 Biosynthesis of amino acids 2
Genes directly connected with PGR5-LIKE A on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.0 AT1G18060 microbial collagenase [detail] 838386
8.3 SHM1 serine transhydroxymethyltransferase 1 [detail] 829949
8.0 TRXF1 thioredoxin F-type 1 [detail] 821260
7.9 AT1G32220 NAD(P)-binding Rossmann-fold superfamily protein [detail] 840114
7.8 AT1G29700 Metallo-hydrolase/oxidoreductase superfamily protein [detail] 839847
7.0 DXR 1-deoxy-D-xylulose 5-phosphate reductoisomerase [detail] 836400
5.4 AT2G25605 DNA-directed RNA polymerase subunit beta [detail] 817100
Coexpressed
gene list		 [Coexpressed gene list for PGR5-LIKE A]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
254298_at
254298_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
254298_at
254298_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
254298_at
254298_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 828388      
Refseq ID (protein) NP_001078431.1 
NP_001078432.1 
NP_001320036.1 
NP_567672.1 
NP_849423.1 


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