[][] ath   At4g23540 Gene
functional annotation
Function   ARM repeat superfamily protein Plant GARDENPlant GARDEN JBrowse
GO BP
GO:0009892 [list] [network] negative regulation of metabolic process  (1067 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
KEGG
Protein NP_194085.4 
BLAST NP_194085.4 
Orthologous [Ortholog page] LOC4325385 (osa)LOC7473613 (ppo)LOC25483457 (mtr)LOC100795433 (gma)LOC101250792 (sly)LOC103861182 (bra)LOC123072590 (tae)LOC123076622 (tae)LOC123442212 (hvu)
Subcellular
localization
wolf
nucl 3,  chlo 3,  cysk_nucl 2,  plas 1,  mito 1,  vacu 1,  E.R. 1,  golg_plas 1,  E.R._vacu 1,  cyto_plas 1  (predict for NP_194085.4)
Subcellular
localization
TargetP
other 8,  chlo 4  (predict for NP_194085.4)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 6
ath03020 RNA polymerase 2
Genes directly connected with AT4G23540 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
10.0 AT1G69070 nucleolar-like protein [detail] 843239
9.3 NRPA2 nuclear RNA polymerase A2 [detail] 839872
9.0 AT2G34357 ARM repeat superfamily protein [detail] 2745580
Coexpressed
gene list
[Coexpressed gene list for AT4G23540]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
254238_at
254238_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
254238_at
254238_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
254238_at
254238_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 828454    
Refseq ID (protein) NP_194085.4 


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