[←][→] ath   At4g23570 Gene
functional annotation
Function   phosphatase-like protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:1900150 [list] [network] regulation of defense response to fungus  (40 genes)  IMP  
GO:0071365 [list] [network] cellular response to auxin stimulus  (88 genes)  IMP  
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (230 genes)  ISS  
GO:0071456 [list] [network] cellular response to hypoxia  (241 genes)  HEP  
GO:0009793 [list] [network] embryo development ending in seed dormancy  (697 genes)  IGI  
GO:0006952 [list] [network] defense response  (2370 genes)  IMP  
GO CC
GO:0019005 [list] [network] SCF ubiquitin ligase complex  (41 genes)  ISS  
GO:0005829 [list] [network] cytosol  (2559 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10305 genes)  HDA ISM  
GO MF
GO:0051087 [list] [network] chaperone binding  (12 genes)  IEA  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG ath04626 [list] [network] Plant-pathogen interaction (204 genes)
Protein NP_001031704.1  NP_194088.1  NP_849429.1 
BLAST NP_001031704.1  NP_194088.1  NP_849429.1 
Orthologous [Ortholog page] SGT1B (ath)  LOC4326682 (osa)  LOC7468358 (ppo)  LOC11436240 (mtr)  LOC18106438 (ppo)  LOC25496516 (mtr)  LOC100049034 (tae)  LOC100194420 (gma)  LOC100194421 (gma)  LOC100780174 (gma)  LOC100784022 (gma)  LOC101258374 (sly)  SGT1-1 (sly)  LOC103833887 (bra)  LOC103858599 (bra)  LOC103861407 (bra)  LOC112327244 (ppo)  LOC123061535 (tae)  LOC123070173 (tae)  LOC123443917 (hvu) 
Subcellular
localization
wolf
chlo 5,  cyto 4,  nucl 1,  plas 1,  nucl_plas 1  (predict for NP_001031704.1)
chlo 5,  cyto 3,  nucl 1,  cyto_pero 1,  cyto_E.R. 1  (predict for NP_194088.1)
chlo 5,  cyto 3,  nucl 1,  cyto_pero 1,  cyto_E.R. 1  (predict for NP_849429.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001031704.1)
other 8  (predict for NP_194088.1)
other 8  (predict for NP_849429.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 5
ath03040 Spliceosome 3
ath04144 Endocytosis 2
ath04626 Plant-pathogen interaction 2
Genes directly connected with SGT1A on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
8.8 J3 DNAJ homologue 3 [detail] 823531
8.7 SR45a RNA-binding (RRM/RBD/RNP motifs) family protein [detail] 837246
8.4 J2 DNAJ homologue 2 [detail] 832267
6.2 GSTF8 glutathione S-transferase phi 8 [detail] 819386
Coexpressed
gene list		 [Coexpressed gene list for SGT1A]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
254211_at
254211_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
254211_at
254211_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
254211_at
254211_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 828457      
Refseq ID (protein) NP_001031704.1 
NP_194088.1 
NP_849429.1 


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