[←][→] ath   At4g23800 Gene
functional annotation
Function   HMG (high mobility group) box protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0048523 [list] [network] negative regulation of cellular process  (960 genes)  IEA  
GO CC
GO:0000794 [list] [network] condensed nuclear chromosome  (13 genes)  IDA  
GO:0000793 [list] [network] condensed chromosome  (31 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0003677 [list] [network] DNA binding  (1277 genes)  IDA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1576 genes)  ISS  
KEGG
Protein NP_001190816.1  NP_194111.1 
BLAST NP_001190816.1  NP_194111.1 
Orthologous [Ortholog page] 3xHMG-box1 (ath)  LOC4328927 (osa)  LOC7467101 (ppo)  LOC7497834 (ppo)  LOC25502164 (mtr)  LOC100781995 (gma)  LOC100783033 (gma)  LOC100814709 (gma)  LOC101262334 (sly)  LOC103833907 (bra)  LOC103861435 (bra)  LOC123046610 (tae)  LOC123049950 (tae)  LOC123190342 (tae)  LOC123427779 (hvu) 
Subcellular
localization
wolf
cyto 6,  nucl 2,  mito 1  (predict for NP_001190816.1)
cyto 5,  nucl 3,  mito 1,  cysk_nucl 1,  nucl_plas 1  (predict for NP_194111.1)
Subcellular
localization
TargetP
chlo 8,  other 4  (predict for NP_001190816.1)
chlo 8,  other 4  (predict for NP_194111.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with 3xHMG-box2 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
17.1 TOPII topoisomerase II [detail] 821972
16.6 HIK ATP binding microtubule motor family protein [detail] 838418
14.5 AT5G55520 kinesin-like protein [detail] 835646
10.3 3xHMG-box1 HMG (high mobility group) box protein [detail] 826709
7.2 AT1G09470 myosin heavy chain, cardiac protein [detail] 837470
Coexpressed
gene list		 [Coexpressed gene list for 3xHMG-box2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
254233_at
254233_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
254233_at
254233_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
254233_at
254233_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 828480      
Refseq ID (protein) NP_001190816.1 
NP_194111.1 


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