[][] ath   AT4G23820 Gene
functional annotation
Function   Pectin lyase-like superfamily protein
GO BP
GO:0071555 [list] [network] cell wall organization  (538 genes)  IEA  
GO:0005975 [list] [network] carbohydrate metabolic process  (995 genes)  IEA  
GO CC
GO:0005576 [list] [network] extracellular region  (3363 genes)  IEA  
GO:0005829 [list] [network] cytosol  (3506 genes)  HDA  
GO MF
GO:0004650 [list] [network] polygalacturonase activity  (52 genes)  IEA  
GO:0016829 [list] [network] lyase activity  (412 genes)  IEA  
KEGG
Protein NP_194113.1 
BLAST NP_194113.1 
Orthologous [Ortholog page] LOC4326618 (osa)LOC4328920 (osa)LOC4339762 (osa)LOC7497842 (ppo)LOC11437037 (mtr)LOC25490549 (mtr)LOC100250089 (vvi)LOC100273574 (zma)LOC100283011 (zma)LOC100384246 (zma)LOC100785590 (gma)LOC100816170 (gma)LOC100818820 (gma)LOC101258581 (sly)LOC103861440 (bra)LOC103861445 (bra)
Subcellular
localization
wolf
chlo 4,  extr 2,  chlo_mito 2,  cyto 1,  E.R. 1,  cyto_E.R. 1  (predict for NP_194113.1)
Subcellular
localization
TargetP
scret 9  (predict for NP_194113.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT4G23820 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
6.8 AT5G03120 transmembrane protein [detail] 831807
6.5 AT3G16850 Pectin lyase-like superfamily protein [detail] 820938
6.5 TET10 tetraspanin10 [detail] 842632
4.7 HA11 H[+]-ATPase 11 [detail] 836388
3.9 VGT1 vacuolar glucose transporter 1 [detail] 821117
Coexpressed
gene list
[Coexpressed gene list for AT4G23820]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
254221_at
254221_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
254221_at
254221_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
254221_at
254221_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 828482    
Refseq ID (protein) NP_194113.1 


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