[←][→] ath   At4g23860 Gene
functional annotation
Function   PHD finger protein-like protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0040029 [list] [network] epigenetic regulation of gene expression  (146 genes)  IEA  
GO:0045892 [list] [network] negative regulation of DNA-templated transcription  (205 genes)  IEA  
GO:0051128 [list] [network] regulation of cellular component organization  (269 genes)  IEA  
GO:0051301 [list] [network] cell division  (442 genes)  IEA  
GO:0048507 [list] [network] meristem development  (457 genes)  IEA  
GO:2000241 [list] [network] regulation of reproductive process  (507 genes)  IEA  
GO:0009793 [list] [network] embryo development ending in seed dormancy  (697 genes)  IEA  
GO:0009266 [list] [network] response to temperature stimulus  (843 genes)  IEA  
GO:0009892 [list] [network] negative regulation of metabolic process  (1067 genes)  IEA  
GO:0006996 [list] [network] organelle organization  (1102 genes)  IEA  
GO:0044085 [list] [network] cellular component biogenesis  (1358 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  HDA  
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (78 genes)  IEA  
GO:0008270 [list] [network] zinc ion binding  (429 genes)  IEA  
KEGG
Protein NP_001078436.1  NP_001329017.1  NP_194117.3  NP_974600.1 
BLAST NP_001078436.1  NP_001329017.1  NP_194117.3  NP_974600.1 
Orthologous [Ortholog page] LOC4341197 (osa)  LOC7465318 (ppo)  LOC7467089 (ppo)  LOC11427483 (mtr)  LOC100527913 (gma)  LOC100817441 (gma)  LOC101256507 (sly)  LOC103861481 (bra)  LOC123147925 (tae)  LOC123156743 (tae)  LOC123164922 (tae)  LOC123406989 (hvu) 
Subcellular
localization
wolf
nucl 8,  cyto 1  (predict for NP_001078436.1)
nucl 5,  chlo 3,  cyto_nucl 3  (predict for NP_001329017.1)
nucl 8,  cyto 1  (predict for NP_194117.3)
nucl 8,  cyto 1  (predict for NP_974600.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001078436.1)
other 4,  scret 4  (predict for NP_001329017.1)
other 8  (predict for NP_194117.3)
other 8  (predict for NP_974600.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 6
ath03430 Mismatch repair 5
ath03410 Base excision repair 5
ath03420 Nucleotide excision repair 4
Genes directly connected with AT4G23860 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
6.2 POLD3 DNA-directed DNA polymerase [detail] 844201
5.9 ARP apurinic endonuclease-redox protein [detail] 818744
5.7 EMB2775 ATPase family associated with various cellular activities (AAA) [detail] 832836
Coexpressed
gene list		 [Coexpressed gene list for AT4G23860]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
254177_at
254177_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
254177_at
254177_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
254177_at
254177_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 828485      
Refseq ID (protein) NP_001078436.1 
NP_001329017.1 
NP_194117.3 
NP_974600.1 


The preparation time of this page was 0.3 [sec].